Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq19246 138 9e-28
seq22228 89.7 4e-13
>seq19246
Length=256796
Score = 138 bits (152), Expect = 9e-28
Identities = 151/199 (76%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 34447 GTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGC 34506
|| || ||||||||||| || || || || || ||||| || | ||||| ||||| |
Sbjct 132416 GTCTGGGCGCCCAGCTCACATCCAAAATATTTAGTCGGATAGGTAGCCGGTCGTCCTATG 132357
Query 34507 GCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCG 34566
||| || | ||| | |||||| || | ||| |||||||||||||| |||||||||||
Sbjct 132356 GCCCGAGCCACTTCAGCCATGTTCACAAGGACGGTCTTGATGCCGTTTCCCTTTCCTTCT 132297
Query 34567 ACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGT 34624
||||| || ||||| || ||||| || ||||| || || ||||| |||| ||||||
Sbjct 132296 ACCTTTGCCTGCAGA--CGTGGCATCTTATAGCGATAAAAGATGTCCGTCACACTGCGGT 132239
Query 34625 TAACGTTCACAGTCCCCAT 34643
||||||| || || ||||
Sbjct 132238 TAACGTTTACGGTGGCCAT 132220
>seq22228
Length=358660
Score = 89.7 bits (98), Expect = 4e-13
Identities = 106/141 (75%), Gaps = 6/141 (4%)
Strand=Plus/Plus
Query 107171 GGACTGCACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCC 107230
|| |||||||| |||||||||||||| || || |||| || ||||||||| | ||| ||
Sbjct 288014 GGTCTGCACGGATTCCACGTGCACGAGTTCGGTGACAACACCAACGGCTGCATGTCATCC 288073
Query 107231 GGTGAACACTTCAATCCCACATAC--CAA-AATCACGGTGCGCCCGACGCCGTAGAAAGG 107287
|| |||||||||| | ||| ||| | ||||| || |||| || || || |
Sbjct 288074 GGGCCGCACTTCAATC---CTTACGGCAAGGAGCACGGCGCCCCCGCCGACGAGGACCGC 288130
Query 107288 CACGTCGGCGATCTGGGCAAC 107308
||| | |||||||||||||||
Sbjct 288131 CACCTGGGCGATCTGGGCAAC 288151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412726786041767
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |