Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq21692 100 4e-16
seq21516 100 4e-16
seq4557 98.7 1e-15
seq22228 96.9 5e-15
seq22281 95.1 2e-14
seq20076 89.7 7e-13
seq20002 89.7 7e-13
>seq21692
Length=958343
Score = 100 bits (110), Expect = 4e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
||||||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| |
Sbjct 42533 TATTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 42474
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 42473 TTCCCCGTCGGGGAG 42459
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 42238 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 42297
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 42298 CCCGTCGGGGAG 42309
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 42237 GTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 42296
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 42297 CCCCGTCGGGGAG 42309
Score = 87.8 bits (96), Expect = 2e-12
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 42530 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 42471
Query 11789 CCCGACGAGGAGGGAGGTTA 11808
|||| || |||| | ||||
Sbjct 42470 CCCGTCGGGGAGATAAGTTA 42451
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 42309 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 42250
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 42249 TACTATCGAGGA 42238
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 42459 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 42518
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 42519 TACTATCGAGGA 42530
>seq21516
Length=453175
Score = 100 bits (110), Expect = 4e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
||||||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| |
Sbjct 211992 TATTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 212051
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 212052 TTCCCCGTCGGGGAG 212066
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 212434 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 212375
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 212374 CCCGTCGGGGAG 212363
Score = 95.1 bits (104), Expect = 2e-14
Identities = 70/82 (85%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409
|| |||| || |||||| | |||||||||||||||| | |||| |||||||| ||||||
Sbjct 245475 CATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 245534
Query 139410 CTATACTAACGAGGATTTTGGT 139431
|||||||| ||||||| |||||
Sbjct 245535 CTATACTATCGAGGATGTTGGT 245556
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 245549 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 245490
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 245489 CCCGTCGGGGAG 245478
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 327405 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 327346
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 327345 CCCGTCGGGGAG 327334
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 393197 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 393138
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 393137 CCCGTCGGGGAG 393126
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 165742 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 165801
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 165802 CCCGTCGGGGAG 165813
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 166200 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 166141
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 166140 CCCGTCGGGGAG 166129
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 171516 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 171457
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 171456 CCCGTCGGGGAG 171445
Score = 89.7 bits (98), Expect = 7e-13
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 327405 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 327346
Query 11789 CCCGACGAGGAGGGAGGTTAA 11809
|||| || |||| || || ||
Sbjct 327345 CCCGTCGGGGAGAGATGTAAA 327325
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 327334 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 327393
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 327394 TACTATCGAGGATGTTG 327410
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 327523 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 327582
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 327583 CCCGTCGGGGAG 327594
Score = 89.7 bits (98), Expect = 7e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 393198 GTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 393139
Query 11788 CCCCGACGAGGAGG 11801
||||| || |||||
Sbjct 393138 CCCCGTCGGGGAGG 393125
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 165741 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 165800
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 165801 CCCCGTCGGGGAG 165813
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 166201 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 166142
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 166141 CCCCGTCGGGGAG 166129
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409
|| |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||
Sbjct 171442 CATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 171501
Query 139410 CTATACTAACGAGGATTT 139427
|||||||| |||||||||
Sbjct 171502 CTATACTATCGAGGATTT 171519
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 211995 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 212054
Query 11789 CCCGACGAGGAGG 11801
|||| || |||||
Sbjct 212055 CCCGTCGGGGAGG 212067
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 212435 GTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 212376
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 212375 CCCCGTCGGGGAG 212363
Score = 87.8 bits (96), Expect = 2e-12
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 327523 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 327582
Query 11789 CCCGACGAGGAGGGAGGT 11806
|||| || |||| || ||
Sbjct 327583 CCCGTCGGGGAGAGATGT 327600
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 171516 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 171457
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 171456 CCCGTCGGGGAG 171445
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409
|| |||| || |||||| | |||||||||||||||| | |||| |||||||| ||||||
Sbjct 212069 CACCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 212010
Query 139410 CTATACTAACGAGGA 139424
|||||||| ||||||
Sbjct 212009 CTATACTATCGAGGA 211995
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 212363 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 212422
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 212423 TACTATCGAGGA 212434
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 245549 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 245490
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 245489 CCCGTCGGGGAG 245478
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 327594 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 327535
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 327534 TACTATCGAGGATGTTG 327518
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 393126 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 393185
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 393186 TACTATCGAGGA 393197
Score = 82.4 bits (90), Expect = 1e-10
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 165813 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 165754
Query 139413 TACTAACGAGGATTTTGGTACACGC 139437
||||| |||||| |||| ||||
Sbjct 165753 TACTATCGAGGACGGTGGTTGACGC 165729
>seq4557
Length=397059
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715
|||||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||
Sbjct 221082 ATTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 221141
Query 8716 TCCCCGACGAGGAG 8729
|||||| || ||||
Sbjct 221142 TCCCCGTCGGGGAG 221155
Score = 87.8 bits (96), Expect = 2e-12
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 221155 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 221096
Query 139413 TACTAACGAGGATTTTGGTACAC 139435
||||| |||||| ||| |||||
Sbjct 221095 TACTATCGAGGA-ATTGATACAC 221074
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 221084 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 221143
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 221144 CCCGTCGGGGAG 221155
>seq22228
Length=358660
Score = 96.9 bits (106), Expect = 5e-15
Identities = 77/92 (84%), Gaps = 2/92 (2%)
Strand=Plus/Plus
Query 139349 ACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACC 139408
||| |||| || |||||| | |||||||||||||||| | |||| |||||||| |||||
Sbjct 193189 ACATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACC 193248
Query 139409 ACTATACTAACGAGGATTTTGGTACACGCTGA 139440
||||||||| ||||||| ||| ||| |||||
Sbjct 193249 ACTATACTATCGAGGATGTTG--ACAAGCTGA 193278
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 193264 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 193205
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 193204 CCCGTCGGGGAG 193193
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 193264 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 193205
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 193204 CCCGTCGGGGAG 193193
>seq22281
Length=154308
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 151294 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 151235
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 151234 CCCGTCGGGGAG 151223
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139349 ACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACC 139408
||| |||| || |||||| | |||||||||||||||| | |||| |||||||| |||||
Sbjct 151219 ACATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACC 151278
Query 139409 ACTATACTAACGAGGAT 139425
||||||||| |||||||
Sbjct 151279 ACTATACTATCGAGGAT 151295
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 151294 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 151235
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 151234 CCCGTCGGGGAG 151223
>seq20076
Length=424525
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 18112 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 18171
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 18172 CCCGTCGGGGAG 18183
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 18183 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 18124
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 18123 TACTATCGAGGATGTTG 18107
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 18112 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 18171
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 18172 CCCGTCGGGGAG 18183
>seq20002
Length=45248
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 32011 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 32070
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 32071 CCCGTCGGGGAG 32082
Score = 89.7 bits (98), Expect = 7e-13
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 32522 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 32463
Query 11789 CCCGACGAGGAGGGAGGTTAA 11809
|||| || |||| || || ||
Sbjct 32462 CCCGTCGGGGAGAGATGTGAA 32442
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 32522 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 32463
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 32462 CCCGTCGGGGAG 32451
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||
Sbjct 32010 GTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 32069
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 32070 CCCCGTCGGGGAG 32082
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139348 CACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAAC 139407
|||| |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||
Sbjct 32087 CACATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGAC 32028
Query 139408 CACTATACTAACGAGGA 139424
|||||||||| ||||||
Sbjct 32027 CACTATACTATCGAGGA 32011
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 32451 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 32510
Query 139413 TACTAACGAGGATTTTG 139429
||||| ||||||| |||
Sbjct 32511 TACTATCGAGGATGTTG 32527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652658584181360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |