Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq8502 253 2e-62
seq1813 250 2e-61
seq8501 242 4e-59
seq22228 145 7e-30
seq20501 98.7 9e-16
seq5502 96.9 3e-15
seq22266 91.5 1e-13
seq22190 91.5 1e-13
>seq8502
Length=4749
Score = 253 bits (280), Expect = 2e-62
Identities = 947/1462 (65%), Gaps = 37/1462 (3%)
Strand=Plus/Plus
Query 146572 GCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGA 146631
|| || || |||||||||| || ||||| || || || || ||| | ||| |||| |
Sbjct 1182 GCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGTCCAGCTTTCCAAGAGTAA 1241
Query 146632 TTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGG 146691
|||||| || |||| | | || | ||||| ||||| || ||| ||||| ||
Sbjct 1242 AAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACATGAATATTGAACGACTGA 1301
Query 146692 CTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGCGTTTTGTCTTC-AT 146750
||||| ||||| || || || || || ||||| | ||| || | || || ||
Sbjct 1302 CTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATTGTG-GACTTCACTGAGAT 1360
Query 146751 TTCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAAT 146810
|||||| | |||||||| || | ||| | | ||||| ||||| ||| ||
Sbjct 1361 TTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATGGTCTCAATACCTTGGAT 1420
Query 146811 AGAGCCCTTGTGCGCAAAAATAGTGTTTCGT-ATTTCGGGCGTGTAAAGGTTTAGTTTAA 146869
|||||| || | || || || ||| | || ||| | | || || | |
Sbjct 1421 GGAGCCCCTGCTGGAAATGATC-TGGTTCTTCATGTCGTCATCCCACAAGTCGAGCTCAG 1479
Query 146870 TGAGGTCA-TCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTG 146928
| | ||| |||| |||| || |||||||| || || || || | ||| || ||||||
Sbjct 1480 TTAAGTCCCTCAAC-AAATGATGGTTGACCACCTGGAATTCACCAGACAGAACTCGTCTG 1538
Query 146929 AGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTG 146988
||| | || | || | ||||| ||||| || || || || | ||||| || ||
Sbjct 1539 GTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTA 1598
Query 146989 GTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTG 147048
| || |||||||| || || | || || || || | ||||| | ||||
Sbjct 1599 GACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGAC 1658
Query 147049 TCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGG 147108
||||| | ||||||| ||||||| || ||| || |||||||||||||||
Sbjct 1659 TCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATGTCGTACTGC 1718
Query 147109 AGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCC 147168
|| | |||| || |||| || || | | || ||| || ||| |||||||
Sbjct 1719 AGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCTGCGCC 1778
Query 147169 AATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGG 147228
| ||||||||| || || || || || ||||| || ||||| || || | || |
Sbjct 1779 AGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATTCAAA 1838
Query 147229 ACGGTCG-CTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACC 147287
| | || ||||||| || || || || | |||| || | ||||| || || |||||
Sbjct 1839 AAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGCGAAACC 1898
Query 147288 CTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATGG 147346
||| | ||||| ||| | || ||||| | ||| ||| || ||| | | ||
Sbjct 1899 CTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGC-CTCTGGGAGGG 1957
Query 147347 GATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTT 147406
|||| |||| |||||| ||||||||||| || || || || | | |
Sbjct 1958 GATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCCT 2017
Query 147407 TGAGTTTCTCGAAATCA---TAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGA 147463
| ||||||| ||||||| | || || | ||| | ||| ||| | ||||
Sbjct 2018 TAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGAC----AAACAT--GTTAAGAGCGA 2071
Query 147464 TAGACGCCAGATTGCAGACGGCCGTCTC-TTCGGCGTCGCTGTACTGCACGATTTCGGCG 147522
| || ||||| ||||| || || |||| | ||||| | || | |||||||| | |
Sbjct 2072 TGGATGCCAGGTTGCACACTGCAATCTCATCCGGCG-AGGAATATTCAACGATTTCTGTG 2130
Query 147523 CACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCG 147582
|||| ||||||||| || ||| || | || ||||| |||||||||| ||||| ||
Sbjct 2131 CACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCA 2190
Query 147583 TCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTA 147639
|| ||||||||||| ||||| ||| || || || |||| |||| || |||||
Sbjct 2191 TCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACC-- 2248
Query 147640 TGCAGGTCCTGCGCTCGCACCCGCTGCCGATAG--CGGCCCTCGTTTTCGTACCGCTCGT 147697
|| | ||| || ||| | | | | | || ||||| | ||||| ||
Sbjct 2249 -ACAAGGACTGAGCCTTGACC--GTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGT 2305
Query 147698 ACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACA 147757
||| | ||| || || ||||| || |||| ||||| || || | ||||| ||||
Sbjct 2306 ACAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACA 2365
Query 147758 TCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCG 147817
|||||||||| | || | || | |||||| ||| || ||||| || | ||| || |
Sbjct 2366 TCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGG 2425
Query 147818 CGTACATAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAG 147875
|||| | ||||||| |||| | | ||||| ||| |||| || | | ||
Sbjct 2426 CGTAAAACAGATCGCGGGCGCGATTC--TCCTCCTTGCCAGTGTTTTTCTTGAGTTCCAG 2483
Query 147876 CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTT 147935
| | ||| || | ||||||||| || | ||| | ||| | ||||| ||||||
Sbjct 2484 AAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTT 2543
Query 147936 TCCG---CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAG 147992
||| ||||| || |||| ||| ||| ||||| || || | || |||||| | ||
Sbjct 2544 GCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAG 2603
Query 147993 GCCGCTCGCAGTGCCGTTGGTG 148014
||| | | |||||| || |||
Sbjct 2604 GCCATTGGAAGTGCCATTCGTG 2625
>seq1813
Length=4749
Score = 250 bits (276), Expect = 2e-61
Identities = 947/1463 (65%), Gaps = 40/1463 (3%)
Strand=Plus/Plus
Query 146572 GCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGA 146631
|| || || |||||||||| || ||||| || || || || ||| | ||| |||| |
Sbjct 1182 GCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGTCCAGCTTTCCAAGAGTAA 1241
Query 146632 TTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGG 146691
|||||| || |||| | | || | ||||| ||||| || ||| ||||| ||
Sbjct 1242 AAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACATGAATATTGAACGACTGA 1301
Query 146692 CTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGCGTTTTGTCTTC-AT 146750
||||| ||||| || || || || || ||||| | ||| || | || || ||
Sbjct 1302 CTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATTGTG-GACTTCACTGAGAT 1360
Query 146751 TTCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAAT 146810
|||||| | |||||||| || | ||| | | ||||| ||||| ||| ||
Sbjct 1361 TTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATGGTCTCAATACCTTGGAT 1420
Query 146811 AGAGCCCTTGTGCGCAAAAATAGTGTTTCGT-ATTTCGGGCGTGTAAAGGTTTAGTTTAA 146869
|||||| || | || || || ||| | || ||| | | || || | |
Sbjct 1421 GGAGCCCCTGCTGGAAATGATC-TGGTTCTTCATGTCGTCATCCCACAAGTCGAGCTCAG 1479
Query 146870 TGAGGTCA-TCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTG 146928
| | ||| |||| |||| || |||||||| || || || || | ||| || ||||||
Sbjct 1480 TTAAGTCCCTCAAC-AAATGATGGTTGACCACCTGGAATTCACCAGACAGAACTCGTCTG 1538
Query 146929 AGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTG 146988
||| | || | || | ||||| ||||| || || || || | ||||| || ||
Sbjct 1539 GTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTA 1598
Query 146989 GTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTG 147048
| || |||||||| || || | || || || || | ||||| | ||||
Sbjct 1599 GACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGAC 1658
Query 147049 TCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGG 147108
||||| | ||||||| ||||||| || ||| || |||||||||||||||
Sbjct 1659 TCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATGTCGTACTGC 1718
Query 147109 AGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCC 147168
|| | |||| || |||| || || | | || ||| || ||| |||||||
Sbjct 1719 AGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCTGCGCC 1778
Query 147169 AATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG- 147227
| ||||||||| || || || || || ||||| || ||||| || || | || |
Sbjct 1779 AGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATTCAAA 1838
Query 147228 -GACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAAC 147286
||| | || ||||| || || || || | |||| || | ||||| || || ||||
Sbjct 1839 AGACCG--GCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGCGAAAC 1896
Query 147287 CCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATG 147345
|||| | ||||| ||| | || ||||| | ||| ||| || ||| | | |
Sbjct 1897 CCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGC-CTCTGGGAGG 1955
Query 147346 GGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTT 147405
||||| |||| |||||| ||||||||||| || || || || | |
Sbjct 1956 GGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCC 2015
Query 147406 TTGAGTTTCTCGAAATCA---TAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCG 147462
|| ||||||| ||||||| | || || | ||| | ||| ||| | |||
Sbjct 2016 TTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGAC----AAACAT--GTTAAGAGCG 2069
Query 147463 ATAGACGCCAGATTGCAGACGGCCGTCTC-TTCGGCGTCGCTGTACTGCACGATTTCGGC 147521
|| || ||||| ||||| || || |||| | ||||| | || | |||||||| |
Sbjct 2070 ATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCG-AGGAATATTCAACGATTTCTGT 2128
Query 147522 GCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGC 147581
||||| ||||||||| || ||| || | || ||||| |||||||||| ||||| ||
Sbjct 2129 GCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGC 2188
Query 147582 GTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCT 147638
|| ||||||||||| ||||| ||| || || || |||| |||| || |||||
Sbjct 2189 ATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACC- 2247
Query 147639 ATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAG--CGGCCCTCGTTTTCGTACCGCTCG 147696
|| | ||| || ||| | | | | | || ||||| | ||||| |
Sbjct 2248 --ACAAGGACTGAGCCTTGACC--GTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTG 2303
Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756
|||| | ||| || || ||||| || |||| ||||| || || | ||||| |||
Sbjct 2304 TACAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCAC 2363
Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816
||||||||||| | || | || | |||||| ||| || ||||| || | ||| ||
Sbjct 2364 ATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGG 2423
Query 147817 GCGTACATAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAA 147874
||||| | ||||||| |||| | | ||||| ||| |||| || | | |
Sbjct 2424 GCGTAAAACAGATCGCGGGCGCGATTC--TCCTCCTTGCCAGTGTTTTTCTTGAGTTCCA 2481
Query 147875 GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCT 147934
| | | ||| || | ||||||||| || | ||| | ||| | ||||| |||||
Sbjct 2482 GAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCT 2541
Query 147935 TTCCG---CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCA 147991
| ||| ||||| || |||| ||| ||| ||||| || || | || |||||| | |
Sbjct 2542 TGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTA 2601
Query 147992 GGCCGCTCGCAGTGCCGTTGGTG 148014
|||| | | |||||| || |||
Sbjct 2602 GGCCATTGGAAGTGCCATTCGTG 2624
>seq8501
Length=20033
Score = 242 bits (268), Expect = 4e-59
Identities = 952/1468 (65%), Gaps = 48/1468 (3%)
Strand=Plus/Minus
Query 146572 GCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGA 146631
|| || || |||||||||| || ||||| || || || || ||| | ||| |||| |
Sbjct 2774 GCGGCTGGCTTTGTGCGCAGGTAGTACATTCCGGTCTTAAGTCCAGCTTTCCAAGAGTAA 2715
Query 146632 TTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGG 146691
|||||| || |||| | | || | ||||| ||||| || ||| ||||| ||
Sbjct 2714 AAGTGAATGGACGTCAATTTTCCATAGTTTGGCTCAGCCACATGAATATTGAACGACTGA 2655
Query 146692 CTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGCGTTTTGTCTTC-AT 146750
||||| ||||| || || || || || ||||| | ||| || | || || ||
Sbjct 2654 CTTTGGTCTATAAACGCCCCACGATCAGCGGCCATTTTAATTGTG-GACTTCACTGAGAT 2596
Query 146751 TTCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAAT 146810
|||||| | |||||||| || | ||| | | ||||| ||||| ||| ||
Sbjct 2595 TTCCCACACAGTTTTGTAAAGATCGCGAACTTTCTGGGGAATGGTCTCAATACCTTGGAT 2536
Query 146811 AGAGCCCTTGTGCGCAAAAATAGTGTTTCGT-ATTTCGGGCGTGTAAAGGTTTAGTTTAA 146869
|||||| || | || || || ||| | || ||| | | || || | |
Sbjct 2535 GGAGCCCCTGCTGGAAATGATC-TGGTTCTTCATGTCGTCATCCCACAAGTCGAGCTCAG 2477
Query 146870 TGAGGTCA-TCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTG 146928
| | ||| |||| |||| || |||||||| || || || || | ||| || ||||||
Sbjct 2476 TTAAGTCCCTCAAC-AAATGATGGTTGACCACCTGGAATTCACCAGACAGAACTCGTCTG 2418
Query 146929 AGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTG 146988
||| | || | || | ||||| ||||| || || || || | ||||| || ||
Sbjct 2417 GTATAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTA 2358
Query 146989 GTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTG 147048
| || |||||||| || || | || || || || | ||||| | ||||
Sbjct 2357 GACGCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGAC 2298
Query 147049 TCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGG 147108
||||| | ||||||| ||||||| || ||| || |||||||||||||||
Sbjct 2297 TCCTTTAGTTTTTGCCAATCCCACAGGTTCGTTGGCTGTTTGTCCCACATGTCGTACTGC 2238
Query 147109 -AGCACTCCTCGACTGGCGGGACTG-CCAGCGAACGTAGTG-TAGCTTCCGTCGCGCTGC 147165
|| | |||| || |||| || || | | ||| | ||| || ||| ||||
Sbjct 2237 TAGAATTCCTTTGCTCACGGGGCTTACCCTCATAGGTACTCATAGGGACCTTCGACCTGC 2178
Query 147166 GCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTT 147225
|||| ||||||||| || || || || || ||||| || ||||| || || | ||
Sbjct 2177 GCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATTC 2118
Query 147226 AG--GACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCA 147283
| ||| | |||||||| || || || || | |||| || | ||||| || || |
Sbjct 2117 AAAAGACCG--GCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGCGA 2060
Query 147284 AACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCT 147342
||||||| | ||||| ||| | || ||||| | ||| ||| || ||| |
Sbjct 2059 AACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGC-CTCTGGG 2001
Query 147343 ATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATT 147402
| |||||| |||| |||||| ||||||||||| || || || || | |
Sbjct 2000 AGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACT 1941
Query 147403 GTTTTGAGTTTCTCGAAATCA---TAAGTCCCGTCTTCGACACGTACGCATTGGTTCACG 147459
|| ||||||| ||||||| | || || | ||| | ||| ||| |
Sbjct 1940 TCCTTAAGTTTCTGGAAATCAAATTTTTTCTCGGGTGTGAC----AAACAT--GTTAAGA 1887
Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTC-TTCGGCGTCGCTGTACTGCACGATTTC 147518
||||| || ||||| ||||| || || |||| | ||||| | || | ||||||||
Sbjct 1886 GCGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCG-AGGAATATTCAACGATTTC 1828
Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCA 147578
| ||||| ||||||||| || ||| || | || ||||| |||||||||| |||||
Sbjct 1827 TGTGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCA 1768
Query 147579 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAA 147635
|| || ||||||||||| ||||| ||| || || || |||| |||| || |||
Sbjct 1767 GGCATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAA 1708
Query 147636 CCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAG--CGGCCCTCGTTTTCGTACCGC 147693
|| || | ||| || ||| | | | | | || ||||| | |||||
Sbjct 1707 CC---ACAAGGACTGAGCCTTGACC--GTTCGGTTCGCACGACCCTCTTGCTCGTATTTA 1653
Query 147694 TCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGA 147753
||||| | ||| || || ||||| || |||| ||||| || || | |||||
Sbjct 1652 GTGTACAGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGG 1593
Query 147754 CACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCAC 147813
|||||||||||||| | || | || | |||||| ||| || ||||| || | |||
Sbjct 1592 CACATCAGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAA 1533
Query 147814 AGCGCGTACATAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTC--AA 147869
|| ||||| | ||||||| |||| | | ||||| ||| |||| |||| |
Sbjct 1532 AGGGCGTAAAACAGATCGCGGGCGCGATTC--TCCTCCTTGCCAGTGTT---TTTCTGAG 1478
Query 147870 ATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTT 147929
| || | | ||| || | ||||||||| || | ||| | ||| | |||||
Sbjct 1477 TTCCAGAAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGG 1418
Query 147930 ACGCTTTCCG---CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGG 147986
|||||| ||| ||||| || |||| ||| ||| ||||| || || | || ||||||
Sbjct 1417 ACGCTTGCCGCCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGG 1358
Query 147987 TTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014
| ||||| | | |||||| || |||
Sbjct 1357 AACTAGGCCATTGGAAGTGCCATTCGTG 1330
>seq22228
Length=358660
Score = 145 bits (160), Expect = 7e-30
Identities = 239/341 (70%), Gaps = 9/341 (3%)
Strand=Plus/Minus
Query 51541 CAATACCGATGATGCCGCAGCCGAGACGTCCGCCCGAGTTGCCCGTGGTCTTGCTCAGCG 51600
|||| || |||| |||||| || | || |||| | ||||||||||| ||||||||||
Sbjct 288347 CAATGCCAATGACGCCGCATCCAATGCGAGCGCCAGCGTTGCCCGTGGACTTGCTCAGCT 288288
Query 51601 GATGGTCGGTGAGGCCGAGATCGTCGCGCTTTGCGTGAACCACCAGACTGCGGCCAACGA 51660
||| || ||||||||| ||| | ||||| ||||||| |||| || | ||
Sbjct 288287 CGTGGCCGCCCTTGCCGAGATCATCGGCATCGGCGTGGACCACCACGGTGCGTCCGATGA 288228
Query 51661 CGCTATTTTCGCCGAAAAGCGTCATCACGTTGTCGATCTTGTCCACTTCGGTGAGGGCGT 51720
||| | ||||||| ||||| ||| |||| | || || | ||| || ||
Sbjct 288227 TGCTGTCGGCGCCGAAGAGCGTGATCCTCGAGTCGGTGATGGTGACCTTCGTGGGGCAGT 288168
Query 51721 TGGACACTTTAGCCTCGACATTGCCCAAGTCGCCGACGTGGCG--CATCGCCG-CGTTCG 51777
| | | ||||| | ||||||| ||||| | |||||| | ||| || || |
Sbjct 288167 CGC---CGGTGGCCTCAATGTTGCCCAGATCGCCCAGGTGGCGGTCCTCGTCGGCG---G 288114
Query 51778 GAGCGCCGTGGTCGCTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGC 51837
| |||||||| || ||||| || |||||||| || | ||| |||||||||||
Sbjct 288113 GGGCGCCGTGCTCCTTGCCGTAAGGATTGAAGTGCGGCCCGGATGACATGCAGCCGTTGG 288054
Query 51838 TGGTGTCGCCGAATTCGTGCACGTGGAATCCGTGCAGGCCC 51878
|| |||| ||||| ||||||||||||||||||||||| |||
Sbjct 288053 TGTTGTCACCGAACTCGTGCACGTGGAATCCGTGCAGACCC 288013
>seq20501
Length=31302
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| |||| ||||| || | | ||||| || |||||||| ||||| | |||
Sbjct 11122 ACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGT 11181
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| |||||| ||||| || || | |||| |||||||| ||||||||||| || ||
Sbjct 11182 ACGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCC 11241
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|||||| || ||| || ||| | | ||| | ||| || | ||| || || || |
Sbjct 11242 TTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGACGGTTCGACCTCAAG 11301
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || || || || || | ||| ||||||||
Sbjct 11302 AGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 11343
>seq5502
Length=68615
Score = 96.9 bits (106), Expect = 3e-15
Identities = 148/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
|||||| || | | | || || || || |||||||||||| | ||| || ||||||
Sbjct 6065 AACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCGTCCATCTTC 6124
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
||||| || |||| | |||| |||||||| |||||||| || || || || || ||
Sbjct 6125 AAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTG 6184
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
|| || |||| | || | || |||| |||||||| || | || | |||||
Sbjct 6185 GATCTTGGCCTTCACATTCTCGATCGTGTCGGATGGCTCCACCTCAAGGGTAATGGTTTT 6244
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|||||||| || || | ||| || ||||||
Sbjct 6245 GCCAGTCAGGGTCTTCACGAAGATTTGCATG 6275
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
|||||| || | | | || || || || |||||||||||| | ||| || ||||||
Sbjct 6521 AACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTC 6580
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
| ||| || || | | || |||||||| |||||||| || || || || |||||
Sbjct 6581 CAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGGGGGAATTCCCTCCTTATCCTG 6640
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
||| || |||| | ||| | || || | ||||||||||||| || | |||||
Sbjct 6641 AATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGCTCCACTTCGAGAGTGATGGTTTT 6700
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| |||| || |||| ||| || ||||||
Sbjct 6701 TCCGGTCAAGGTCTTTACGAAGATTTGCATG 6731
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | || || || || |||||||||||| | ||| || ||||||
Sbjct 7206 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCGTCCATCTTCA 7265
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
||||| || |||| | |||| |||||||| || ||||| || ||||| || ||||| |
Sbjct 7266 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTGA 7325
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || || | | || | ||||||| |||||||| || | || | || ||
Sbjct 7326 ATCTTGGCCTTTACATTCTCGATCGTATCGGAAGGCTCCACCTCCAAAGTAATGGTCTTG 7385
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||| || || | || ||||||||
Sbjct 7386 CCAGTCAATGTCTTCACAAAGATCTGCAT 7414
>seq22266
Length=384576
Score = 91.5 bits (100), Expect = 1e-13
Identities = 154/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| ||| | |||| ||| | | | ||||| || || ||||||||||| || |||
Sbjct 109162 ACGCAGGCGGAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGT 109221
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| || ||||| || |||| |||| |||||||| |||||||| || |||||
Sbjct 109222 GCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCC 109281
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || || || |||| | || | || || | |||||||| || |
Sbjct 109282 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAA 109341
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | || || || || || ||||| | |||||| ||||||
Sbjct 109342 GGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCATG 109384
>seq22190
Length=927835
Score = 91.5 bits (100), Expect = 1e-13
Identities = 154/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| |||| |||||||| | | ||||| || || |||||||||||| || |||
Sbjct 837746 ACGCAGACGCAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGT 837687
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| || || | ||| || || | | |||| | |||||| || ||||| || |||||
Sbjct 837686 GCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCC 837627
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| || || ||||| |||| | || | ||||||| ||||| || || |
Sbjct 837626 TTCCTTGTCCTGGATTTTAGCCTTCACGTTCTCAATGGTATCGGAGGGCTCGACCTCAAG 837567
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | || || ||||| ||||| || | || |||||||||
Sbjct 837566 GGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCATG 837524
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| ||| | ||||| || | | | ||||| || || |||||||||||| || |||
Sbjct 837291 ACGCAGGCGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGT 837232
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| |||||||| |||| |||| | ||||| || ||||| || || ||
Sbjct 837231 GCGTCCATCTTCCAGCTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCC 837172
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || || || |||| | || | ||||||| ||||| || || |
Sbjct 837171 CTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTATCGGAAGGCTCAACCTCCAA 837112
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | || || || |||| ||| || | ||||| ||||||
Sbjct 837111 AGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAAATTTGCATG 837069
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/223 (69%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| || | ||||| || | | | ||||| || || |||||||||||| || |||
Sbjct 837518 ACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGT 837459
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| || || | ||| || || | | |||| | |||||| || ||||| || |||||
Sbjct 837458 GCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCC 837399
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| || || ||||| |||| | || | ||||||| ||||| || || |
Sbjct 837398 TTCCTTGTCCTGGATTTTAGCCTTCACGTTCTCGATGGTATCGGAGGGCTCGACCTC-AA 837340
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | || || ||||| ||||| || | || |||||||||
Sbjct 837339 GGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCATG 837297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476475252612840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |