Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq22232 223 4e-53
>seq22232
Length=226448
Score = 223 bits (246), Expect = 4e-53
Identities = 457/677 (68%), Gaps = 22/677 (3%)
Strand=Plus/Plus
Query 146841 GAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTT 146900
||| || || ||||||| |||| | | | ||| || |||||||||||||| || |
Sbjct 53754 GAAGTCTTCGATGTCCTGCACCTGGCGCTTGATCACCAGTTTGGGGAAGGGTCGCGGCGT 53813
Query 146901 CCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAG 146960
| ||| || || | || || ||||| || || |||||||| | || || |
Sbjct 53814 ACGCTTCAGTTGCTCCTTTAATGGGTCTACGTGATTCAGATAGACGTGGGTATCGCCAAA 53873
Query 146961 GGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAG 147020
|||||||| ||||| || ||||| || || || || || || | ||||| ||||| ||
Sbjct 53874 CGTGTGCACGAAGTCGCCAGGCTTCAGACCCGTAACATGAGCGATCATGTGAGTGAGAAG 53933
Query 147021 CGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAG 147080
| |||| ||| ||||| ||||| || |||||||||||||| | ||||||||||||
Sbjct 53934 GGCGTAGGAGGCGATGTTAAAGGGCACGCCCAGGCCCATGTCGGCGCTCCTCTGGTACAG 53993
Query 147081 CTGGCACGAGAGCTCCCCG------TCGGCCACGTAAAACTGGCACAGGATGTGGCACGG 147134
|||||| ||||| || ||| | || ||||| ||||| ||| |||||||||
Sbjct 53994 CTGGCAGGAGAGTTCGCCGCGCGTCTGGGAGACGTAGAACTGCGCTAGGCAGTGGCACGG 54053
Query 147135 CGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCT 147194
|||||||||||| || | ||| | || ||||| || || | | | |||||
Sbjct 54054 CGGCAGCGCCATCTTCGGTATGTCTACTGGATTCCAAGCTGACATGATAATGCGCCTATC 54113
Query 147195 CTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCC 147254
| ||| ||| |||| || ||||| ||| | || |||||| | ||||| ||
Sbjct 54114 CGAGGGATTCTTCTTGATGGTGTCGATTACCTGACGCAACTGGTCGATGCCCTTTCCAGT 54173
Query 147255 GTAGTTTGTCC-CGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACA 147313
||| | |||| ||||| | ||| || |||||||||| ||||||||| || ||||
Sbjct 54174 ATAG-TCGTCCTCGCAGGTGCCATACTCTGCGCCAAAGTGCCGCCACTGGAAACCATACA 54232
Query 147314 CTGGCCCCAGGTCGCC----GGGCTTTCTGTGCGAGAAGCCCGCCCGCTTG---AGAAAC 147366
| || ||||| ||||| | || || ||| | | || | ||| || |||
Sbjct 54233 CCGGGCCCAGATCGCCGACAGCGCGCTCCGTGTG-------CCCCAGATTGTCCAGGAAC 54285
Query 147367 TCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCC 147426
|| || | || ||||||||| | |||| |||||| ||| ||| | ||||
Sbjct 54286 TCCCTGGTGCTGTTCCCGTCCCAGAAGTGCACTTTCTTGGCCTGCAGCAGCTTGGCGTCC 54345
Query 147427 GTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTG 147486
|| ||| | |||||||||||||| || || || | ||||||| | ||||
Sbjct 54346 GTTTTGCCGGCCACAAACCAGAGCAGCTCTTCGGCCACACCGCGAAAAAAGACGCGCTTG 54405
Query 147487 GTGGTCAGCAGGGGGAA 147503
|||||||| || || ||
Sbjct 54406 GTGGTCAGTAGAGGAAA 54422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583321567341600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |