Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1813 168 6e-37 seq8502 167 2e-36 seq8501 163 2e-35 seq5502 105 6e-18 >seq1813 Length=4749 Score = 168 bits (186), Expect = 6e-37 Identities = 704/1101 (64%), Gaps = 24/1101 (2%) Strand=Plus/Plus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || |||||||| ||||| ||||||| ||| ||||| ||||||| || ||||| || Sbjct 1155 TTATCTACGGTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCG 1214 Query 130466 GTTTTGAGTCCAATTTTGTGTCCA----TAATTGTGGATGCTGCACATTGTTTGGTAATT 130521 || || |||||| ||| ||| ||| ||| ||| || | || || || Sbjct 1215 GTCTTAAGTCCAGCTTT----CCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTT 1270 Query 130522 GGGTTGCGCCAC--GAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCT 130579 || | ||||| |||||| ||| ||| || ||| || ||||| || || | || Sbjct 1271 TGGCTCAGCCACATGAATAT--TGAACGACTGACTTTGGTCTATAAACGCCCCACGATCA 1328 Query 130580 GCAGCCATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTA 130639 || ||||| | | ||| || | || ||||| | || ||||| ||||| | | Sbjct 1329 GCGGCCATTTTAATTGTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGA 1388 Query 130640 ATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTG 130699 | | | ||| ||| | |||| ||| | | || || ||| || || | ||| Sbjct 1389 ACTTTCTGGGGAATGGTCTCAATACCTTGGATGGAGCCCCTGCTGGAAATGATCTGGTTC 1448 Query 130700 CGCATACTTTTATCGTACAATCCAAGCT--GTACAAGATCTTTTACCAAATGATTATTAA 130757 ||| | ||| |||| | |||| || ||| || | | |||||||| || | Sbjct 1449 TTCATGTCGTCATCCCACAAGTCGAGCTCAGTT-AAG-TCCCTCAACAAATGATGGTTGA 1506 Query 130758 TGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAA 130817 | || || ||||||| ||| || ||||| |||||||| | || | || || | Sbjct 1507 CCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGA 1566 Query 130818 AGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATA 130877 | ||||||||||| || | ||||| || |||| || || ||||| || || | | Sbjct 1567 AAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCA 1626 Query 130878 GAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAG 130937 | || || || | ||||||| | |||| ||| | || | ||||||||| || Sbjct 1627 GGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGT 1686 Query 130938 AGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGG 130997 || || | |||| |||||| || | || || || ||||| || |||| || Sbjct 1687 TCGTTGGCT---GTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTC 1743 Query 130998 ATTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTC 131057 || | | || ||| |||||||| | ||||| || ||| ||||||| || | Sbjct 1744 CCTCATAGGTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCAC 1803 Query 131058 CGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAG 131117 |||| ||||| ||||| || || | ||| || | || | | || || || | Sbjct 1804 CGTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCCTCTTCACTTTCATATG 1863 Query 131118 GAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTAT 131177 | ||| ||| | ||| || ||||| |||| |||||| | || | |||||| || | || Sbjct 1864 GGAATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGAT 1923 Query 131178 GTTTTAAATTACATTTACGCGAACATTCGGTGGGATAAAGGTTAATGTCAATTATTTTGT 131237 || | ||||| |||| | | | |||||||| ||| || |||||||| |||| Sbjct 1924 GTCTCAAATTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTGT 1983 Query 131238 TTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAG 131297 | | ||| || | | || || || | ||| | ||||||||| | Sbjct 1984 TGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTT---TT 2040 Query 131298 TTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCGT 131357 | ||| | | ||||| || | | || || ||||| || || ||||| | || | Sbjct 2041 TCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCAT 2100 Query 131358 CATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAAT 131417 | | |||| | ||| ||||| | |||||| || |||| ||| |||||||| | | Sbjct 2101 CCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACGT 2160 Query 131418 TTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCCCGTT 131476 | || || |||||||| | | || | |||||| | | ||| || || |||| ||| Sbjct 2161 TCTGCTGGTTGCTTTT-CCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGTT 2219 Query 131477 TCGACTTGAGTTTCAATAATG 131497 || || || | ||||||||| Sbjct 2220 TCCACCTGCGACTCAATAATG 2240 >seq8502 Length=4749 Score = 167 bits (184), Expect = 2e-36 Identities = 705/1102 (64%), Gaps = 25/1102 (2%) Strand=Plus/Plus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || |||||||| ||||| ||||||| ||| ||||| ||||||| || ||||| || Sbjct 1155 TTATCTACGGTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCG 1214 Query 130466 GTTTTGAGTCCAATTTTGTGTCCA----TAATTGTGGATGCTGCACATTGTTTGGTAATT 130521 || || |||||| ||| ||| ||| ||| ||| || | || || || Sbjct 1215 GTCTTAAGTCCAGCTTT----CCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTT 1270 Query 130522 GGGTTGCGCCAC--GAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCT 130579 || | ||||| |||||| ||| ||| || ||| || ||||| || || | || Sbjct 1271 TGGCTCAGCCACATGAATAT--TGAACGACTGACTTTGGTCTATAAACGCCCCACGATCA 1328 Query 130580 GCAGCCATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTA 130639 || ||||| | | ||| || | || ||||| | || ||||| ||||| | | Sbjct 1329 GCGGCCATTTTAATTGTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGA 1388 Query 130640 ATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTG 130699 | | | ||| ||| | |||| ||| | | || || ||| || || | ||| Sbjct 1389 ACTTTCTGGGGAATGGTCTCAATACCTTGGATGGAGCCCCTGCTGGAAATGATCTGGTTC 1448 Query 130700 CGCATACTTTTATCGTACAATCCAAGCT--GTACAAGATCTTTTACCAAATGATTATTAA 130757 ||| | ||| |||| | |||| || ||| || | | |||||||| || | Sbjct 1449 TTCATGTCGTCATCCCACAAGTCGAGCTCAGTT-AAG-TCCCTCAACAAATGATGGTTGA 1506 Query 130758 TGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAA 130817 | || || ||||||| ||| || ||||| |||||||| | || | || || | Sbjct 1507 CCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGA 1566 Query 130818 AGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATA 130877 | ||||||||||| || | ||||| || |||| || || ||||| || || | | Sbjct 1567 AAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCA 1626 Query 130878 GAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAG 130937 | || || || | ||||||| | |||| ||| | || | ||||||||| || Sbjct 1627 GGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGT 1686 Query 130938 AGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGG 130997 || || | |||| |||||| || | || || || ||||| || |||| || Sbjct 1687 TCGTTGGCT---GTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTC 1743 Query 130998 ATTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTC 131057 || | | || ||| |||||||| | ||||| || ||| ||||||| || | Sbjct 1744 CCTCATAGGTCTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGGCAC 1803 Query 131058 CGTAATAAATGGTTTCGGCAATTTGTTTATT-TAATTGTTTCGCTTGGTTGCTCTCGTAA 131116 |||| ||||| ||||| || || | ||| || | |||| | || || || Sbjct 1804 CGTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAAGACCGGCTTCTTCACTTTCATAT 1863 Query 131117 GGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTA 131176 || ||| ||| | ||| || ||||| |||| |||||| | || | |||||| || | | Sbjct 1864 GGGAATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGACGA 1923 Query 131177 TGTTTTAAATTACATTTACGCGAACATTCGGTGGGATAAAGGTTAATGTCAATTATTTTG 131236 ||| | ||||| |||| | | | |||||||| ||| || |||||||| ||| Sbjct 1924 TGTCTCAAATTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCTTG 1983 Query 131237 TTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCA 131296 || | ||| || | | || || || | ||| | ||||||||| | Sbjct 1984 TTGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTT---T 2040 Query 131297 GTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCG 131356 | ||| | | ||||| || | | || || ||||| || || ||||| | || Sbjct 2041 TTCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCTCA 2100 Query 131357 TCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAA 131416 || | |||| | ||| ||||| | |||||| || |||| ||| |||||||| | Sbjct 2101 TCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAACG 2160 Query 131417 TTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCCCGT 131475 || || || |||||||| | | || | |||||| | | ||| || || |||| || Sbjct 2161 TTCTGCTGGTTGCTTTT-CCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCAGT 2219 Query 131476 TTCGACTTGAGTTTCAATAATG 131497 ||| || || | ||||||||| Sbjct 2220 TTCCACCTGCGACTCAATAATG 2241 >seq8501 Length=20033 Score = 163 bits (180), Expect = 2e-35 Identities = 707/1104 (64%), Gaps = 27/1104 (2%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || |||||||| ||||| ||||||| ||| ||||| ||||||| || ||||| || Sbjct 2801 TTATCTACGGTGAACTGAATTGCATTGGCGGCTGGCTTTGTGCGCAGGTAGTACATTCCG 2742 Query 130466 GTTTTGAGTCCAATTTTGTGTCCA----TAATTGTGGATGCTGCACATTGTTTGGTAATT 130521 || || |||||| ||| ||| ||| ||| ||| || | || || || Sbjct 2741 GTCTTAAGTCCAGCTTT----CCAAGAGTAAAAGTGAATGGACGTCAATTTTCCATAGTT 2686 Query 130522 GGGTTGCGCCAC--GAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCT 130579 || | ||||| |||||| ||| ||| || ||| || ||||| || || | || Sbjct 2685 TGGCTCAGCCACATGAATAT--TGAACGACTGACTTTGGTCTATAAACGCCCCACGATCA 2628 Query 130580 GCAGCCATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTA 130639 || ||||| | | ||| || | || ||||| | || ||||| ||||| | | Sbjct 2627 GCGGCCATTTTAATTGTGGACTTCACTGAGATTTCCCACACAGTTTTGTAAAGATCGCGA 2568 Query 130640 ATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTG 130699 | | | ||| ||| | |||| ||| | | || || ||| || || | ||| Sbjct 2567 ACTTTCTGGGGAATGGTCTCAATACCTTGGATGGAGCCCCTGCTGGAAATGATCTGGTTC 2508 Query 130700 CGCATACTTTTATCGTACAATCCAAGCT--GTACAAGATCTTTTACCAAATGATTATTAA 130757 ||| | ||| |||| | |||| || ||| || | | |||||||| || | Sbjct 2507 TTCATGTCGTCATCCCACAAGTCGAGCTCAGTT-AAG-TCCCTCAACAAATGATGGTTGA 2450 Query 130758 TGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAA 130817 | || || ||||||| ||| || ||||| |||||||| | || | || || | Sbjct 2449 CCACCTGGAATTCACCAGACAGAACTCGTCTGGTATAAATGTTCGTGGTATAGGGCTCGA 2390 Query 130818 AGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATA 130877 | ||||||||||| || | ||||| || |||| || || ||||| || || | | Sbjct 2389 AAGATTCGTTGTTTCCCATAATTTGAGCAGTAGACGCAGTAGGCATAGGGGCAACAAGCA 2330 Query 130878 GAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAG 130937 | || || || | ||||||| | |||| ||| | || | ||||||||| || Sbjct 2329 GGGAGTTCCGGACACCGTGCTTTTTGATGGACTCCTTTAGTTTTTGCCAATCCCACAGGT 2270 Query 130938 AGGTAGGTTTGACATTGTTCCACATATCAAATTG-TAGTATGCCTTTACTGGCGGGAC-T 130995 || || | |||| |||||| || | || ||| || ||||| || |||| | | Sbjct 2269 TCGTTGGCT---GTTTGTCCCACATGTCGTACTGCTAGAATTCCTTTGCTCACGGGGCTT 2213 Query 130996 GGATTCGAACG-ATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAG 131054 || | | | || ||| |||||||| | ||||| || ||| ||||||| | Sbjct 2212 ACCCTCATAGGTACTCATAGGGACCTTCGACCTGCGCCAGTTCACAGCTGGCTTCCAGGG 2153 Query 131055 CTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGT 131114 | ||||| ||||| ||||| || || | ||| || | |||| | || || | Sbjct 2152 CACCGTAGTAAATCGTTTCAAATATCTGCTGATTCAAAAGACCGGCTTCTTCACTTTCAT 2093 Query 131115 AAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTC 131174 | || ||| ||| | ||| || ||||| |||| |||||| | || | |||||| || | Sbjct 2092 ATGGGAATCGCATGAGAATCAAGGCGTCAGCGAAACCCTGAACACCGATGCCCACGGGAC 2033 Query 131175 TATGTTTTAAATTACATTTACGCGAACATTCGGTGGGATAAAGGTTAATGTCAATTATTT 131234 |||| | ||||| |||| | | | |||||||| ||| || |||||||| | Sbjct 2032 GATGTCTCAAATTGGATTTCTTTGCCTCTGGGAGGGGATAAAAGTTGATATCAATTATCT 1973 Query 131235 TGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGC 131294 |||| | ||| || | | || || || | ||| | ||||||||| | Sbjct 1972 TGTTGAGATTTTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTGGAAATCAAATTT-- 1915 Query 131295 CAGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTT 131354 | ||| | | ||||| || | | || || ||||| || || ||||| | | Sbjct 1914 -TTTCTCGGGTGTGACAAACATGTTAAGAGCGATGGATGCCAGGTTGCACACTGCAATCT 1856 Query 131355 CGTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCA 131414 | || | |||| | ||| ||||| | |||||| || |||| ||| |||||||| | Sbjct 1855 CATCCGGCGAGGAATATTCAACGATTTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAA 1796 Query 131415 AATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCCC 131473 || || || |||||||| | | || | |||||| | | ||| || || |||| Sbjct 1795 CGTTCTGCTGGTTGCTTTT-CCTGTTGCAGGCATCCTTGAAGAGCATATACGGGTTGCCA 1737 Query 131474 GTTTCGACTTGAGTTTCAATAATG 131497 ||||| || || | ||||||||| Sbjct 1736 GTTTCCACCTGCGACTCAATAATG 1713 >seq5502 Length=68615 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | ||||| || | || || || || || || ||||||||| Sbjct 6046 TGCCACCGCGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGG 6105 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || | ||||| ||||| || ||||| | || |||||||| ||||| || | Sbjct 6106 AAAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGG 6165 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCA 27197 | | |||||| || || ||||||| |||| | || | ||||| | ||||| || Sbjct 6166 GAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGATGGCTCCA 6225 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || || || | |||||| ||||| || ||||| ||||||||||| Sbjct 6226 CCT-CAAGGGTAATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 6274 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | ||||| || | || || || || || || ||||||||| Sbjct 6502 TGCCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGG 6561 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| | ||||| | ||| || || ||| ||||||||||||| ||||| || | Sbjct 6562 AAAGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGGGG 6621 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCA 27197 | | ||||| ||||| ||||| |||| |||| | ||||| | |||| || Sbjct 6622 GAATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGC-TCC 6680 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||||| || | ||| || |||| || || || ||||||||||| Sbjct 6681 ACTTCGAGAGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 6730 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || || | ||||||||||| || | || || || ||||| || ||||| || Sbjct 6730 TGCCACCACGAAGACGCAATACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCAG 6789 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || |||| || || || || ||||| | || | ||||| ||||| || | Sbjct 6790 ACAACGTACGTCCGTCCTCCAGTTGCTTGCCGGCAAAGATTAATCGCTGCTGATCTGGGG 6849 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCA 27197 | | |||||| || || ||||||| |||| | || | ||||| | |||| || Sbjct 6850 GAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGATGGC-TCG 6908 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || | |||||| ||||| || ||||| ||||||||||| Sbjct 6909 ACCTCAAGGGTAATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 6958 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||| | || | ||||| || || || || || || || || || || ||| | Sbjct 5820 CCTCCGCGGAGACGGAGCACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAATCGGAC 5879 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| | ||| || |||||| | || | |||||| ||||| || || Sbjct 5880 AGAGTGCGTCCATCTTCCAACTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 5939 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| |||| | | || | || || | || ||| ||| Sbjct 5940 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTATCAGAGGGTTCGACT 5999 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || || | ||| || |||| || || || ||||||||||| Sbjct 6000 TCCAAGGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 6046 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | ||||| || | || || || || || || |||||||| Sbjct 6958 TGCCACCGCGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCG 7017 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| | ||||| | ||| || || ||| ||||||||||||| ||||| || | Sbjct 7018 AAAGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGGGG 7077 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| ||||| ||||| |||| |||| | ||||| | | ||| | Sbjct 7078 GAATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGTTCGA 7137 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| | || || | || || |||| || || || ||||||||||| Sbjct 7138 CTTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 7186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424816222954728