Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq22136 111 5e-19
>seq22136
Length=515022
Score = 111 bits (122), Expect = 5e-19
Identities = 354/536 (66%), Gaps = 30/536 (6%)
Strand=Plus/Minus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
|| ||||| |||||||| |||| || |||||||||||| |||| ||| | || ||
Sbjct 290442 TTCTGGACTGTGGAGGAGGTTGACCTGTCCAAGGACTTGACCGACTGGCAT---CGTCT- 290387
Query 443397 TCTAG--CCATGAACGCGATTTCTTCAAATGCATCTTGGCCTTCTTTGCACCGAGCGACG 443454
| || | |||| || | ||| || | | |||||||||| || | ||| |
Sbjct 290386 -CAAGGACGATGAGCGTCACTTCATCTCGCACGTGCTGGCCTTCTTCGCCGCCTCCGATG 290328
Query 443455 GTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCC 443514
| || || |||||| || ||| ||| ||| | ||| | ||| |||||||
Sbjct 290327 GCATTGTTAATGAGAACCTCGTGGAGCGCTTCAGTCAGGAGGTGCAGATCACGGAGGCCC 290268
Query 443515 GCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGT 443574
||| |||||||| ||||| ||| ||||||||| | ||| | ||| | ||||| |
Sbjct 290267 GCTGCTTCTACGGATTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGTACAGCGTGC 290208
Query 443575 TGATCAAGACACTAAT-TCCGAACGAAGACGAAC-AGCG-GTCCATCTTCTCATCGT--T 443629
||||| |||||| | |||| | | || || |||| | | |||| ||| || |
Sbjct 290207 TGATC--GACACTTACATCCG---GGATCCGCACCAGCGAGACTATCTGTTCAACGCCAT 290153
Query 443630 CATGACCACGCCAGGCATCACTGAA----AAGACTCGCTGGGCAAAACAGTGGCTCGAAC 443685
| ||| | ||||| | |||| ||| | |||||| ||| || |
Sbjct 290152 CGAGACGATGCCAG----CGGTGAAGCGCAAGGCGGACTGGGCCCTGTCCTGGATCT--C 290099
Query 443686 GAGAAAATCT--CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTT 443743
|| || || |||| ||||| | |||| ||||| | || || || | ||
Sbjct 290098 CTCCAAGTCCGCCAATTTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGAGGGCATCTT 290039
Query 443744 GTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTC 443803
|| |||||||| ||| |||||||| |||||| | || || || || | |||| || |
Sbjct 290038 CTTCAGCGGCAG-TTTCGCCTCCATTTTCTGGCTAAAGAAACGCGGTTTGATGCCGGGCC 289980
Query 443804 TGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCC 443859
||||||| |||||||||||| ||||||||||| ||||| || |||||||||
Sbjct 289979 TGACCTTCTCCAACGAACTGATCTCCCGGGACGAGGGATTGCACTGTGACTTCGCC 289924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1587871620685455
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |