Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8502 192 7e-44 seq1813 190 3e-43 seq8501 183 4e-41 seq22136 111 2e-19 seq20124 107 2e-18 >seq8502 Length=4749 Score = 192 bits (212), Expect = 7e-44 Identities = 887/1389 (64%), Gaps = 39/1389 (3%) Strand=Plus/Plus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 || ||||| || || || || || || |||| || || |||| ||||| || || || Sbjct 1542 TAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGAC 1601 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827 || || ||||| || || | | || ||| || | ||| | || |||||| ||| Sbjct 1602 GCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCC 1661 Query 110828 TTGAGAACATCCCAGTCGTA-------GTTGAGCTTGGTTTCACCTTCCCACATGTCAAA 110880 || || | ||| || | |||| ||| |||| ||||||||||| | Sbjct 1662 TTTAGTTTTTGCCAATCCCACAGGTTCGTTG-GCT--GTTTG----TCCCACATGTCGTA 1714 Query 110881 CTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940 ||| || | |||| | | |||| |||||| |||| ||||||| ||||| | | | Sbjct 1715 CTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCTG 1774 Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000 |||| ||||||||| || ||||||| ||| || || |||||||| || | ||| Sbjct 1775 CGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATT 1834 Query 111001 C---ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGC 111057 | | || |||||| || ||| ||| | | || | ||| || | || || Sbjct 1835 CAAAAAGACC--GGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGC 1892 Query 111058 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT- 111116 || ||| |||||||| | || | || | |||| || ||| || |||| ||| Sbjct 1893 GAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGA-TTTCTTTGCCTCTG 1951 Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 | ||||||||| || | ||||| | ||| |||||||||||||| |||| || | Sbjct 1952 GGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAA 2011 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236 ||| | |||||| | ||||||| | |||| ||||| || | ||| | Sbjct 2012 CTTCCTTAAGTTTCTGGAAATCAAATTT---TTTCTCGGGTGTGACAAACATGTTAAGAG 2068 Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296 |||| ||||||| ||||| || || |||||||| | || || | ||||||| Sbjct 2069 CGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTG 2128 Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356 | || |||||| | |||||| || || | |||| ||||| || ||| ||||||| | Sbjct 2129 TGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGG 2188 Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416 |||||||| ||||||| || || | || || ||| ||| || | | ||| || || Sbjct 2189 CATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACC 2248 Query 111417 A-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 111475 | || | | | || | || | ||| || || ||||| |||||| || ||||| Sbjct 2249 ACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTAC 2307 Query 111476 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 111535 || || || || || ||| | ||| || || || |||| || || | Sbjct 2308 AGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATC 2367 Query 111536 AGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGAT 111595 || ||||| | || |||| || || |||||||| || || || ||||| |||| Sbjct 2368 AGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCG 2427 Query 111596 GAAAAGAGATCTCTACACCGAGCCTCTTCGTCACC-TTGGTTGAGTCGTAACTCAAGGAA 111654 |||| ||||| | ||| ||| || | || || || | | | || || || Sbjct 2428 TAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGAAA 2486 Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGAC 111710 ||| | || ||||| |||||| ||||| || || | || | | || | | | | Sbjct 2487 CTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCC 2546 Query 111711 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 111770 | ||| | |||| |||||||| || ||| || || | ||||| |||| | | Sbjct 2547 G-CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGC 2605 Query 111771 CATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGATG 111829 ||| || ||||| || || | |||| ||| | || || | | ||| | Sbjct 2606 CATTGGAAGTGCCATTCGTGCCGCAAATA-GAGGTGCCTTTTGCCCGGATGCAATGAACA 2664 Query 111830 TGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCAT 111887 | || ||||| || || ||| | || ||||| | ||||| | | || || | Sbjct 2665 TTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGATTT--AA 2722 Query 111888 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 111947 |||| || | ||| ||||| || | ||| | |||||| || |||| |||||| | Sbjct 2723 AGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCGGGC 2782 Query 111948 TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCT 112007 ||| |||| || || ||||| | |||||| |||| | | | |||| Sbjct 2783 GATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACAAAA 2842 Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067 || ||| || |||| | | | |||||| || || || ||||| || ||||| || |||| Sbjct 2843 GGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGCGCA 2902 Query 112068 TGAACATGT 112076 | ||||||| Sbjct 2903 TCAACATGT 2911 >seq1813 Length=4749 Score = 190 bits (210), Expect = 3e-43 Identities = 884/1386 (64%), Gaps = 34/1386 (2%) Strand=Plus/Plus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 || ||||| || || || || || || |||| || || |||| ||||| || || || Sbjct 1542 TAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGAC 1601 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827 || || ||||| || || | | || ||| || | ||| | || |||||| ||| Sbjct 1602 GCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCC 1661 Query 110828 TTGAGAACATCCCAGTCGTA-------GTTGAGCTTGGTTTCACCTTCCCACATGTCAAA 110880 || || | ||| || | |||| ||| |||| ||||||||||| | Sbjct 1662 TTTAGTTTTTGCCAATCCCACAGGTTCGTTG-GCT--GTTTG----TCCCACATGTCGTA 1714 Query 110881 CTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940 ||| || | |||| | | |||| |||||| |||| ||||||| ||||| | | | Sbjct 1715 CTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCTG 1774 Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000 |||| ||||||||| || ||||||| ||| || || |||||||| || | ||| Sbjct 1775 CGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATT 1834 Query 111001 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 111060 || ||| || || ||| ||| | | || | ||| || | || |||| Sbjct 1835 CAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGCGAA 1894 Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAA 111119 ||| |||||||| | || | || | |||| || ||| || |||| ||| | Sbjct 1895 ACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGA-TTTCTTTGCCTCTGGGA 1953 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 ||||||||| || | ||||| | ||| |||||||||||||| |||| || | || Sbjct 1954 GGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACTT 2013 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239 | | |||||| | ||||||| | |||| ||||| || | ||| |||| Sbjct 2014 CCTTAAGTTTCTGGAAATCAAATTT---TTTCTCGGGTGTGACAAACATGTTAAGAGCGA 2070 Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299 | ||||||| ||||| || || |||||||| | || || | |||||||| | Sbjct 2071 TGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGTGC 2130 Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359 | |||||| | |||||| || || | |||| ||||| || ||| ||||||| |||| Sbjct 2131 ACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCAT 2190 Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-A 111418 ||||| ||||||| || || | || || ||| ||| || | | ||| || ||| | Sbjct 2191 CCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACCACA 2250 Query 111419 ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478 | | | | || | || | ||| || || ||||| |||||| || ||||| || Sbjct 2251 AGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTACAGC 2309 Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 || || || || ||| | ||| || || || |||| || || | || Sbjct 2310 TTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATCAGC 2369 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598 ||||| | || |||| || || |||||||| || || || ||||| |||| || Sbjct 2370 GACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCGTAA 2429 Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACC-TTGGTTGAGTCGTAACTCAAGGAACTC 111657 || ||||| | ||| ||| || | || || || | | | || || ||||| Sbjct 2430 AACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGAAACTC 2488 Query 111658 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCC 111713 | || ||||| |||||| ||||| || || | || | | || | | | || | Sbjct 2489 AAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCG-C 2547 Query 111714 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 111773 || | |||| |||||||| || ||| || || | ||||| |||| | |||| Sbjct 2548 CACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCCAT 2607 Query 111774 CTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGATGTGC 111832 || ||||| || || | |||| ||| | || || | | ||| | | | Sbjct 2608 TGGAAGTGCCATTCGTGCCGCAAATA-GAGGTGCCTTTTGCCCGGATGCAATGAACATTC 2666 Query 111833 ATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAGA 111890 | ||||| || || ||| | || ||||| | ||||| | | || || | ||| Sbjct 2667 AGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGATTT--AAAGA 2724 Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950 | || | ||| ||||| || | ||| | |||||| || |||| |||||| | Sbjct 2725 TGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCGGGCGAT 2784 Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGT 112010 ||| |||| || || ||||| | |||||| |||| | | | |||| || Sbjct 2785 TTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACAAAAGGT 2844 Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070 ||| || |||| | | | |||||| || || || ||||| || ||||| || ||||| | Sbjct 2845 TGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGCGCATCA 2904 Query 112071 ACATGT 112076 |||||| Sbjct 2905 ACATGT 2910 >seq8501 Length=20033 Score = 183 bits (202), Expect = 4e-41 Identities = 885/1388 (64%), Gaps = 36/1388 (3%) Strand=Plus/Minus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 || ||||| || || || || || || |||| || || |||| ||||| || || || Sbjct 2414 TAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGAC 2355 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827 || || ||||| || || | | || ||| || | ||| | || |||||| ||| Sbjct 2354 GCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCC 2295 Query 110828 TTGAGAACATCCCAGTCGTA-------GTTGAGCTTGGTTTCACCTTCCCACATGTCAAA 110880 || || | ||| || | |||| ||| |||| ||||||||||| | Sbjct 2294 TTTAGTTTTTGCCAATCCCACAGGTTCGTTG-GCT--GTTTG----TCCCACATGTCGTA 2242 Query 110881 CTGA-AGCACCCCTTGGGACGCGGGAGA-ACCCTCAAAGGTT-TCATAGGAACCTTGGGC 110937 ||| || | |||| | | |||| ||||||| |||| ||||||| ||||| | | Sbjct 2241 CTGCTAGAATTCCTTTGCTCACGGGGCTTACCCTCATAGGTACTCATAGGGACCTTCGAC 2182 Query 110938 TTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGC 110997 | |||| ||||||||| || ||||||| ||| || || |||||||| || | Sbjct 2181 CTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTG 2122 Query 110998 ATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGC 111057 ||||| |||||| || ||| ||| | | || | ||| || | || || Sbjct 2121 ATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGC 2062 Query 111058 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 111117 || ||| |||||||| | || | || | |||| || ||| || || || ||| Sbjct 2061 GAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TCTG 2003 Query 111118 A-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 | ||||||||| || | ||||| | ||| |||||||||||||| |||| || | Sbjct 2002 GGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAA 1943 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236 ||| | |||||| | ||||||| | |||| ||||| || | ||| | Sbjct 1942 CTTCCTTAAGTTTCTGGAAATCAAATTT---TTTCTCGGGTGTGACAAACATGTTAAGAG 1886 Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296 |||| ||||||| ||||| || || |||||||| | || || | ||||||| Sbjct 1885 CGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTG 1826 Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356 | || |||||| | |||||| || || | |||| ||||| || ||| ||||||| | Sbjct 1825 TGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGG 1766 Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416 |||||||| ||||||| || || | || || ||| ||| || | | ||| || || Sbjct 1765 CATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACC 1706 Query 111417 A-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 111475 | || | | | || | || | ||| || || ||||| |||||| || ||||| Sbjct 1705 ACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTAC 1647 Query 111476 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 111535 || || || || || ||| | ||| || || || |||| || || | Sbjct 1646 AGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATC 1587 Query 111536 AGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGAT 111595 || ||||| | || |||| || || |||||||| || || || ||||| |||| Sbjct 1586 AGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCG 1527 Query 111596 GAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 111655 |||| ||||| | ||| ||| || | || ||| || | || || ||| Sbjct 1526 TAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTT-TTTCTGAGTTCCAGAAAC 1468 Query 111656 TCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACG 111711 || | || ||||| |||||| ||||| || || | || | | || | | | || Sbjct 1467 TCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCG 1408 Query 111712 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771 ||| | |||| |||||||| || ||| || || | ||||| |||| | || Sbjct 1407 -CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCC 1349 Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGATGT 111830 || || ||||| || || | |||| ||| | || || | | ||| | | Sbjct 1348 ATTGGAAGTGCCATTCGTGCCGCAAATA-GAGGTGCCTTTTGCCCGGATGCAATGAACAT 1290 Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATA 111888 || ||||| || || ||| | || ||||| | ||||| | | || || | | Sbjct 1289 TCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGATTT--AAA 1232 Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948 ||| || | ||| ||||| || | ||| | |||||| || |||| |||||| | Sbjct 1231 GATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCGGGCG 1172 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 112008 ||| |||| || || ||||| | |||||| |||| | | | |||| Sbjct 1171 ATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACAAAAG 1112 Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068 || ||| || |||| | | | |||||| || || || ||||| || ||||| || ||||| Sbjct 1111 GTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGCGCAT 1052 Query 112069 GAACATGT 112076 ||||||| Sbjct 1051 CAACATGT 1044 >seq22136 Length=515022 Score = 111 bits (122), Expect = 2e-19 Identities = 274/416 (66%), Gaps = 0/416 (0%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || || ||| |||||| |||||||||||||| || || ||| || | ||||| Sbjct 289637 TACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCCATG 289696 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAATGGGTGGCACCCCAACTTGTTTGAGGAGACGA 122490 |||| || || ||||| | ||| | || | || || | || || | ||| Sbjct 289697 AAGTTGAACGGGTTCTTGGTGTTGTAGATCTTTCCAACGCCCAATTCCACCAGCAAACGG 289756 Query 122491 TCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACAT 122550 |||| ||| |||||||||||| ||||| || ||||||| || || ||||| Sbjct 289757 TCCGCCACGAACTCAATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTTACG 289816 Query 122551 GGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGG 122610 || || || || || |||| | | |||||| | ||||| || | ||| || | Sbjct 289817 GGCAGGGCATCGGTGAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCGATG 289876 Query 122611 ATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTGG 122670 || ||| |||||| | | || | || ||| | | |||||| || || | Sbjct 289877 ATGCGCTCGCGCCTGGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCACAG 289936 Query 122671 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCC 122730 || | ||||| || ||||| || ||||| || |||||| || || ||||| | ||| Sbjct 289937 TGCAATCCCTCGTCCCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAACCG 289996 Query 122731 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 122786 || ||||| | ||| |||| | | ||| ||| ||||||||| |||||||| Sbjct 289997 CGTTTCTTTAGCCAGAAAATGGAGGCGAAACTGCCGCTGAAGAAGATGCCCTCCAC 290052 >seq20124 Length=133112 Score = 107 bits (118), Expect = 2e-18 Identities = 183/263 (70%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 181806 TCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTG 181865 ||||| |||||| | | ||| ||||| || ||||| | ||| || || || || |||||| Sbjct 43837 TCTTTGCCACCCGTCAAACGAGTACCGAACTGACCGCGTGGTTCCAGCAGATTGATGTTG 43896 Query 181866 TTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGT-ATCCGCAAGGGACACTTCACC 181924 |||| || | ||| | ||| | || || ||||| ||| |||| | | || || || Sbjct 43897 TTTGCGCCCACAAAGTTCTGGGCGAGATTCACAATGGTCATCTGCAACG-AGACCTCGCC 43955 Query 181925 GTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATC 181984 ||||||||| || ||| | || || || || | | | ||| || ||||||| || Sbjct 43956 GTGGTGGTAGGCGGACATCTCGGCCACCGATCCGGATAGCTGGGCGACCTTCACCTCGCG 44015 Query 181985 TTTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044 ||| |||| | | |||||| | |||| || || | ||| ||||| || ||||| Sbjct 44016 CTTGTCGTTCCTCTTGAAGCAGGTGAACATTACCTTGCGCTGACCCGGCTTAAGTCCATC 44075 Query 182045 CGCCATATGGGCAATAGAGCGCT 182067 | ||| | || ||||||||||| Sbjct 44076 CACCAGACTGGGAATAGAGCGCT 44098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627852861722400