Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq8502 192 7e-44
seq1813 190 3e-43
seq8501 183 4e-41
seq22136 111 2e-19
seq20124 107 2e-18
>seq8502
Length=4749
Score = 192 bits (212), Expect = 7e-44
Identities = 887/1389 (64%), Gaps = 39/1389 (3%)
Strand=Plus/Plus
Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767
|| ||||| || || || || || || |||| || || |||| ||||| || || ||
Sbjct 1542 TAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGAC 1601
Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827
|| || ||||| || || | | || ||| || | ||| | || |||||| |||
Sbjct 1602 GCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCC 1661
Query 110828 TTGAGAACATCCCAGTCGTA-------GTTGAGCTTGGTTTCACCTTCCCACATGTCAAA 110880
|| || | ||| || | |||| ||| |||| ||||||||||| |
Sbjct 1662 TTTAGTTTTTGCCAATCCCACAGGTTCGTTG-GCT--GTTTG----TCCCACATGTCGTA 1714
Query 110881 CTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940
||| || | |||| | | |||| |||||| |||| ||||||| ||||| | | |
Sbjct 1715 CTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCTG 1774
Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000
|||| ||||||||| || ||||||| ||| || || |||||||| || | |||
Sbjct 1775 CGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATT 1834
Query 111001 C---ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGC 111057
| | || |||||| || ||| ||| | | || | ||| || | || ||
Sbjct 1835 CAAAAAGACC--GGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGC 1892
Query 111058 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT- 111116
|| ||| |||||||| | || | || | |||| || ||| || |||| |||
Sbjct 1893 GAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGA-TTTCTTTGCCTCTG 1951
Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
| ||||||||| || | ||||| | ||| |||||||||||||| |||| || |
Sbjct 1952 GGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAA 2011
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236
||| | |||||| | ||||||| | |||| ||||| || | ||| |
Sbjct 2012 CTTCCTTAAGTTTCTGGAAATCAAATTT---TTTCTCGGGTGTGACAAACATGTTAAGAG 2068
Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296
|||| ||||||| ||||| || || |||||||| | || || | |||||||
Sbjct 2069 CGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTG 2128
Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356
| || |||||| | |||||| || || | |||| ||||| || ||| ||||||| |
Sbjct 2129 TGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGG 2188
Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416
|||||||| ||||||| || || | || || ||| ||| || | | ||| || ||
Sbjct 2189 CATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACC 2248
Query 111417 A-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 111475
| || | | | || | || | ||| || || ||||| |||||| || |||||
Sbjct 2249 ACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTAC 2307
Query 111476 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 111535
|| || || || || ||| | ||| || || || |||| || || |
Sbjct 2308 AGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATC 2367
Query 111536 AGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGAT 111595
|| ||||| | || |||| || || |||||||| || || || ||||| ||||
Sbjct 2368 AGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCG 2427
Query 111596 GAAAAGAGATCTCTACACCGAGCCTCTTCGTCACC-TTGGTTGAGTCGTAACTCAAGGAA 111654
|||| ||||| | ||| ||| || | || || || | | | || || ||
Sbjct 2428 TAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGAAA 2486
Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGAC 111710
||| | || ||||| |||||| ||||| || || | || | | || | | | |
Sbjct 2487 CTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCC 2546
Query 111711 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 111770
| ||| | |||| |||||||| || ||| || || | ||||| |||| | |
Sbjct 2547 G-CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGC 2605
Query 111771 CATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGATG 111829
||| || ||||| || || | |||| ||| | || || | | ||| |
Sbjct 2606 CATTGGAAGTGCCATTCGTGCCGCAAATA-GAGGTGCCTTTTGCCCGGATGCAATGAACA 2664
Query 111830 TGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCAT 111887
| || ||||| || || ||| | || ||||| | ||||| | | || || |
Sbjct 2665 TTCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGATTT--AA 2722
Query 111888 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 111947
|||| || | ||| ||||| || | ||| | |||||| || |||| |||||| |
Sbjct 2723 AGATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCGGGC 2782
Query 111948 TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCT 112007
||| |||| || || ||||| | |||||| |||| | | | ||||
Sbjct 2783 GATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACAAAA 2842
Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067
|| ||| || |||| | | | |||||| || || || ||||| || ||||| || ||||
Sbjct 2843 GGTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGCGCA 2902
Query 112068 TGAACATGT 112076
| |||||||
Sbjct 2903 TCAACATGT 2911
>seq1813
Length=4749
Score = 190 bits (210), Expect = 3e-43
Identities = 884/1386 (64%), Gaps = 34/1386 (2%)
Strand=Plus/Plus
Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767
|| ||||| || || || || || || |||| || || |||| ||||| || || ||
Sbjct 1542 TAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGAC 1601
Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827
|| || ||||| || || | | || ||| || | ||| | || |||||| |||
Sbjct 1602 GCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCC 1661
Query 110828 TTGAGAACATCCCAGTCGTA-------GTTGAGCTTGGTTTCACCTTCCCACATGTCAAA 110880
|| || | ||| || | |||| ||| |||| ||||||||||| |
Sbjct 1662 TTTAGTTTTTGCCAATCCCACAGGTTCGTTG-GCT--GTTTG----TCCCACATGTCGTA 1714
Query 110881 CTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940
||| || | |||| | | |||| |||||| |||| ||||||| ||||| | | |
Sbjct 1715 CTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTCTCATAGGGACCTTCGACCTG 1774
Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000
|||| ||||||||| || ||||||| ||| || || |||||||| || | |||
Sbjct 1775 CGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTGATT 1834
Query 111001 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 111060
|| ||| || || ||| ||| | | || | ||| || | || ||||
Sbjct 1835 CAAAAGACCGGCCTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGCGAA 1894
Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAA 111119
||| |||||||| | || | || | |||| || ||| || |||| ||| |
Sbjct 1895 ACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGA-TTTCTTTGCCTCTGGGA 1953
Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179
||||||||| || | ||||| | ||| |||||||||||||| |||| || | ||
Sbjct 1954 GGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAACTT 2013
Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239
| | |||||| | ||||||| | |||| ||||| || | ||| ||||
Sbjct 2014 CCTTAAGTTTCTGGAAATCAAATTT---TTTCTCGGGTGTGACAAACATGTTAAGAGCGA 2070
Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299
| ||||||| ||||| || || |||||||| | || || | |||||||| |
Sbjct 2071 TGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTGTGC 2130
Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359
| |||||| | |||||| || || | |||| ||||| || ||| ||||||| ||||
Sbjct 2131 ACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGGCAT 2190
Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-A 111418
||||| ||||||| || || | || || ||| ||| || | | ||| || ||| |
Sbjct 2191 CCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACCACA 2250
Query 111419 ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478
| | | | || | || | ||| || || ||||| |||||| || ||||| ||
Sbjct 2251 AGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTACAGC 2309
Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538
|| || || || ||| | ||| || || || |||| || || | ||
Sbjct 2310 TTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATCAGC 2369
Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598
||||| | || |||| || || |||||||| || || || ||||| |||| ||
Sbjct 2370 GACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCGTAA 2429
Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACC-TTGGTTGAGTCGTAACTCAAGGAACTC 111657
|| ||||| | ||| ||| || | || || || | | | || || |||||
Sbjct 2430 AACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTTTTTCTTG-AGTTCCAGAAACTC 2488
Query 111658 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCC 111713
| || ||||| |||||| ||||| || || | || | | || | | | || |
Sbjct 2489 AAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCG-C 2547
Query 111714 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 111773
|| | |||| |||||||| || ||| || || | ||||| |||| | ||||
Sbjct 2548 CACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCCAT 2607
Query 111774 CTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGATGTGC 111832
|| ||||| || || | |||| ||| | || || | | ||| | | |
Sbjct 2608 TGGAAGTGCCATTCGTGCCGCAAATA-GAGGTGCCTTTTGCCCGGATGCAATGAACATTC 2666
Query 111833 ATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAGA 111890
| ||||| || || ||| | || ||||| | ||||| | | || || | |||
Sbjct 2667 AGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGATTT--AAAGA 2724
Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950
| || | ||| ||||| || | ||| | |||||| || |||| |||||| |
Sbjct 2725 TGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCGGGCGAT 2784
Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGT 112010
||| |||| || || ||||| | |||||| |||| | | | |||| ||
Sbjct 2785 TTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACAAAAGGT 2844
Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070
||| || |||| | | | |||||| || || || ||||| || ||||| || ||||| |
Sbjct 2845 TGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGCGCATCA 2904
Query 112071 ACATGT 112076
||||||
Sbjct 2905 ACATGT 2910
>seq8501
Length=20033
Score = 183 bits (202), Expect = 4e-41
Identities = 885/1388 (64%), Gaps = 36/1388 (3%)
Strand=Plus/Minus
Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767
|| ||||| || || || || || || |||| || || |||| ||||| || || ||
Sbjct 2414 TAAATGTTCGTGGTATAGGGCTCGAAAGATTCGTTGTTTCCCATAATTTGAGCAGTAGAC 2355
Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827
|| || ||||| || || | | || ||| || | ||| | || |||||| |||
Sbjct 2354 GCAGTAGGCATAGGGGCAACAAGCAGGGAGTTCCGGACACCGTGCTTTTTGATGGACTCC 2295
Query 110828 TTGAGAACATCCCAGTCGTA-------GTTGAGCTTGGTTTCACCTTCCCACATGTCAAA 110880
|| || | ||| || | |||| ||| |||| ||||||||||| |
Sbjct 2294 TTTAGTTTTTGCCAATCCCACAGGTTCGTTG-GCT--GTTTG----TCCCACATGTCGTA 2242
Query 110881 CTGA-AGCACCCCTTGGGACGCGGGAGA-ACCCTCAAAGGTT-TCATAGGAACCTTGGGC 110937
||| || | |||| | | |||| ||||||| |||| ||||||| ||||| | |
Sbjct 2241 CTGCTAGAATTCCTTTGCTCACGGGGCTTACCCTCATAGGTACTCATAGGGACCTTCGAC 2182
Query 110938 TTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGC 110997
| |||| ||||||||| || ||||||| ||| || || |||||||| || |
Sbjct 2181 CTGCGCCAGTTCACAGCTGGCTTCCAGGGCACCGTAGTAAATCGTTTCAAATATCTGCTG 2122
Query 110998 ATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGC 111057
||||| |||||| || ||| ||| | | || | ||| || | || ||
Sbjct 2121 ATTCAAAAGACCGGCTTCTTCACTTTCATATGGGAATCGCATGAGAATCAAGGCGTCAGC 2062
Query 111058 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 111117
|| ||| |||||||| | || | || | |||| || ||| || || || |||
Sbjct 2061 GAAACCCTGAACACCGATGCCCACGGGACGATGTCTCAAATTGGATTTCTTTGCC-TCTG 2003
Query 111118 A-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
| ||||||||| || | ||||| | ||| |||||||||||||| |||| || |
Sbjct 2002 GGAGGGGATAAAAGTTGATATCAATTATCTTGTTGAGATTTTTGGTAACCGTCTTGGTAA 1943
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236
||| | |||||| | ||||||| | |||| ||||| || | ||| |
Sbjct 1942 CTTCCTTAAGTTTCTGGAAATCAAATTT---TTTCTCGGGTGTGACAAACATGTTAAGAG 1886
Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296
|||| ||||||| ||||| || || |||||||| | || || | |||||||
Sbjct 1885 CGATGGATGCCAGGTTGCACACTGCAATCTCATCCGGCGAGGAATATTCAACGATTTCTG 1826
Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356
| || |||||| | |||||| || || | |||| ||||| || ||| ||||||| |
Sbjct 1825 TGCACAAGTTGCTGCACTTAATGGTGCCAACGTTCTGCTGGTTGCTTTTCCTGTTGCAGG 1766
Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416
|||||||| ||||||| || || | || || ||| ||| || | | ||| || ||
Sbjct 1765 CATCCTTGAAGAGCATATACGGGTTGCCAGTTTCCACCTGCGACTCAATAATGGCAAACC 1706
Query 111417 A-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 111475
| || | | | || | || | ||| || || ||||| |||||| || |||||
Sbjct 1705 ACAAGGACTGAGCCTTG-ACCGTTCGGTTCGCACGACCCTCTTGCTCGTATTTAGTGTAC 1647
Query 111476 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 111535
|| || || || || ||| | ||| || || || |||| || || |
Sbjct 1646 AGCTTCTCGAATTCATCGCCCCAGACATCGTGCAGGCCCGGGCATTTGTGCGGGCACATC 1587
Query 111536 AGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGAT 111595
|| ||||| | || |||| || || |||||||| || || || ||||| ||||
Sbjct 1586 AGCGACCAATTCTCATTGGCCTCGACGCGTTTCATGAAGAGATCGGGTATCCAAAGGGCG 1527
Query 111596 GAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 111655
|||| ||||| | ||| ||| || | || ||| || | || || |||
Sbjct 1526 TAAAACAGATCGCGGGCGCGATTCTCCTCCTTGCCAGTGTT-TTTCTGAGTTCCAGAAAC 1468
Query 111656 TCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACG 111711
|| | || ||||| |||||| ||||| || || | || | | || | | | ||
Sbjct 1467 TCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCG 1408
Query 111712 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771
||| | |||| |||||||| || ||| || || | ||||| |||| | ||
Sbjct 1407 -CCACCCTGATCCACATAGCGTGCCACATTGTTGAAGACCCTCAGCATGGGAACTAGGCC 1349
Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGATGT 111830
|| || ||||| || || | |||| ||| | || || | | ||| | |
Sbjct 1348 ATTGGAAGTGCCATTCGTGCCGCAAATA-GAGGTGCCTTTTGCCCGGATGCAATGAACAT 1290
Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATA 111888
|| ||||| || || ||| | || ||||| | ||||| | | || || | |
Sbjct 1289 TCAGTCCAATGCCACCTGCCGATTTCGAGATCATGGCGCAGTGTTCCACCGATTT--AAA 1232
Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948
||| || | ||| ||||| || | ||| | |||||| || |||| |||||| |
Sbjct 1231 GATGCCCTCGATCGAGTCAGCCGTCATGGTCAAAAGGAAACAGGAAGACAGCTGCGGGCG 1172
Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 112008
||| |||| || || ||||| | |||||| |||| | | | ||||
Sbjct 1171 ATTTGTGGCAGCGGCAAAAAGCGTTGGCGATGCGTGGGTGAAGAATCGCTCAGACAAAAG 1112
Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068
|| ||| || |||| | | | |||||| || || || ||||| || ||||| || |||||
Sbjct 1111 GTTGTAGGTTTCCACGGCCGCATCAATATCCTCTCCATGGATTCCTATTGCCACGCGCAT 1052
Query 112069 GAACATGT 112076
|||||||
Sbjct 1051 CAACATGT 1044
>seq22136
Length=515022
Score = 111 bits (122), Expect = 2e-19
Identities = 274/416 (66%), Gaps = 0/416 (0%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
|| || || ||| |||||| |||||||||||||| || || ||| || | |||||
Sbjct 289637 TACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGGGAGATCATCTCCATG 289696
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAATGGGTGGCACCCCAACTTGTTTGAGGAGACGA 122490
|||| || || ||||| | ||| | || | || || | || || | |||
Sbjct 289697 AAGTTGAACGGGTTCTTGGTGTTGTAGATCTTTCCAACGCCCAATTCCACCAGCAAACGG 289756
Query 122491 TCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACAT 122550
|||| ||| |||||||||||| ||||| || ||||||| || || |||||
Sbjct 289757 TCCGCCACGAACTCAATGTACTGCGACATGAGGTCGCAGTTCATGCCAATAAGGTTTACG 289816
Query 122551 GGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGG 122610
|| || || || || |||| | | |||||| | ||||| || | ||| || |
Sbjct 289817 GGCAGGGCATCGGTGAGGAACTCCTGCTCAATGGCCACCGCATCACGGATGATCTCGATG 289876
Query 122611 ATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTGG 122670
|| ||| |||||| | | || | || ||| | | |||||| || || |
Sbjct 289877 ATGCGCTCGCGCCTGGGTCGCTGAACCAGATGCTGGAACATCAGCACGGCGAAGTCACAG 289936
Query 122671 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCC 122730
|| | ||||| || ||||| || ||||| || |||||| || || ||||| | |||
Sbjct 289937 TGCAATCCCTCGTCCCGGGAGATCAGTTCGTTGGAGAAGGTCAGGCCCGGCATCAAACCG 289996
Query 122731 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 122786
|| ||||| | ||| |||| | | ||| ||| ||||||||| ||||||||
Sbjct 289997 CGTTTCTTTAGCCAGAAAATGGAGGCGAAACTGCCGCTGAAGAAGATGCCCTCCAC 290052
>seq20124
Length=133112
Score = 107 bits (118), Expect = 2e-18
Identities = 183/263 (70%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 181806 TCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTG 181865
||||| |||||| | | ||| ||||| || ||||| | ||| || || || || ||||||
Sbjct 43837 TCTTTGCCACCCGTCAAACGAGTACCGAACTGACCGCGTGGTTCCAGCAGATTGATGTTG 43896
Query 181866 TTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGT-ATCCGCAAGGGACACTTCACC 181924
|||| || | ||| | ||| | || || ||||| ||| |||| | | || || ||
Sbjct 43897 TTTGCGCCCACAAAGTTCTGGGCGAGATTCACAATGGTCATCTGCAACG-AGACCTCGCC 43955
Query 181925 GTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATC 181984
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Sbjct 43956 GTGGTGGTAGGCGGACATCTCGGCCACCGATCCGGATAGCTGGGCGACCTTCACCTCGCG 44015
Query 181985 TTTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044
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Sbjct 44016 CTTGTCGTTCCTCTTGAAGCAGGTGAACATTACCTTGCGCTGACCCGGCTTAAGTCCATC 44075
Query 182045 CGCCATATGGGCAATAGAGCGCT 182067
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Sbjct 44076 CACCAGACTGGGAATAGAGCGCT 44098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627852861722400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |