Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22]
22,819 sequences; 197,375,704 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq20501 168 2e-36
seq2591 165 2e-35
seq5502 158 4e-33
seq22190 134 4e-26
seq22266 131 5e-25
seq19466 107 6e-18
seq21441 87.8 5e-12
seq18989 87.8 5e-12
seq21443 86.0 2e-11
>seq20501
Length=31302
Score = 168 bits (186), Expect = 2e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || || | || | ||| ||||| || ||||| ||||| |||||
Sbjct 11116 ACCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGA 11175
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || |||||||| || || || ||||| ||||| ||||| |||||||| |||||
Sbjct 11176 GAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 11235
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|||||||||||| |||||||| || ||||| ||||| || || | || || ||||| ||
Sbjct 11236 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGACGGTTCGAC 11295
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | ||||| || || || || || || || ||||||||
Sbjct 11296 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 11343
>seq2591
Length=155389
Score = 165 bits (182), Expect = 2e-35
Identities = 512/787 (65%), Gaps = 4/787 (1%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
|| || ||| | || || ||||| || |||||| ||| | || || || |||||
Sbjct 130588 CCGGAGGAAGTGTCCTCGATGGTGTTGACCAAAATGCGGGAGACGGCAGAGGCCTATTTG 130529
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|||| | || || || || ||| | || || || |||||||| || || |||||||
Sbjct 130528 GGTGGCTCTGTCACAGACGCGGTTGTCACGGTTCCGGCCTATTTCAACGACTCCCAGCGA 130469
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || ||||| ||| |||||| || || ||||| || | || || || |||
Sbjct 130468 CAGGCCACCAAGGATGCGGGCGCCATTGCCGGCTTGAATGTCCTTCGCATCATCAACGAA 130409
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA-GaaaaaaaTAT 349770
||||| || || || ||||| || || | |||||| | | |||| || ||| |
Sbjct 130408 CCCACGGCGGCGGCCATTGCCTACGGATTGGATAAACAGGGC-ACCAGTGAGCGGAATGT 130350
Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830
|| || || ||| | || ||||| ||||| || ||||| | || || |||| || ||
Sbjct 130349 CCTGATCTTCGATCTCGGCGGTGGCACTTTCGACGTATCCGTGCTGACCATTGAGGATGG 130290
Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890
|| ||||| || || || || ||||| || || ||||||||||| || || ||||| ||
Sbjct 130289 CATCTTTGAGGTGAAGGCCACCGCTGGGGACACTCATCTTGGTGGCGAGGACTTTGACAA 130230
Query 349891 TCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAG 349949
|| || || || || || | || || |||| ||||| || |||| | ||
Sbjct 130229 CCGACTGGTGAACCACTTCGTGCAGGAGTTCCAGCG-CAAGCACAAGCGTGATCTGGGCC 130171
Query 349950 ATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTAT 350009
| ||| | ||| || | || || |||| || |||||||| || ||||| || | |
Sbjct 130170 AAAATAAGCGGGCACTGAGACGTCTGCGAACCGCCTGTGAACGGGCCAAGCGGACCCTCT 130111
Query 350010 CATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTT 350069
| ||| | || || || || || || || || || || ||| || ||||
Sbjct 130110 CCTCTTCCACACAGGCCAGCATCGAGATCGACTCGCTCTTCGAGGGCGTTGACTTCTACA 130051
Query 350070 CATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGG 350129
| || | ||||| || || || || || || |||||| ||| | | || ||||
Sbjct 130050 CCTCGGTGACACGCGCCCGTTTCGAGGAGTTGAACGGGGATCTGTTTCGGGGCACCATGG 129991
Query 350130 ATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAG 350189
| || |||| || | | ||||| || ||| || ||||| | || | |
Sbjct 129990 AGCCGGTGGCCAAGGCGCTGCGCGATGCCAAGATGGATAAGGGCCAGATCCACGACATCG 129931
Query 350190 TTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTA 350249
|| | || || || || || | || || || || || | ||||| || || || |
Sbjct 129930 TTCTGGTGGGCGGCTCAACCAGGATACCCAAGGTGCAGCGTTTACTGCAGGACTTCTTCA 129871
Query 350250 ATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTG 350309
| ||||| || | | || || ||||| ||||| || || || || || || || |
Sbjct 129870 ACGGCAAGGAGCTGAACAAGTCCATCAATCCCGATGAGGCGGTGGCCTACGGAGCCGCAG 129811
Query 350310 TTCAGGC 350316
| |||||
Sbjct 129810 TGCAGGC 129804
>seq5502
Length=68615
Score = 158 bits (174), Expect = 4e-33
Identities = 176/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| ||||| || | | ||||| | ||||| || || || || || || || |
Sbjct 6952 TTTGCATGCCACCGCGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGT 7011
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || |||||||| | || |||||||| || || ||||| |||||||
Sbjct 7012 AGTCCGAAAGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGAT 7071
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || |||||||| || ||||||||||| ||||| || ||||| ||||| | |||||||
Sbjct 7072 CTGGGGGAATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATG 7131
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||| ||||| | || | ||||||||||| | || ||||| || || |||||
Sbjct 7132 GTTCGACTTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 7186
Score = 156 bits (172), Expect = 1e-32
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| ||||| || | || ||||| | ||||| || || || || || || || || ||
Sbjct 6500 CATGCCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTC 6559
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || |||||||| | || |||||||| || || ||||| |||||||| ||
Sbjct 6560 GGAAAGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGG 6619
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||||| || ||||||||||| ||||| || ||||| ||||| | |||||||| ||
Sbjct 6620 GGGAATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGCTC 6679
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || || | || |||||||| | || ||||| || || |||||
Sbjct 6680 CACTTCGAGAGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 6730
Score = 150 bits (166), Expect = 5e-31
Identities = 175/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| ||||| || | | || || | ||||| || || || || || || || |
Sbjct 7180 TTTGCATGCCACCGCGAAGACGGAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGT 7239
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | ||||| ||||||||||| || || || |||||||| ||||| ||||| |
Sbjct 7240 AGTCGGAAAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGT 7299
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| || || ||||||||||| || || |||||||| || |||| ||| || |
Sbjct 7300 CTGGGGGAATGCCCTCCTTATCCTGAATCTTGGCCTTTACATTCTCGATCGTATCGGAAG 7359
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
| || || || | |||| ||||| || || | ||| || ||||| |||||||||
Sbjct 7360 GCTCCACCTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCATT 7415
Score = 145 bits (160), Expect = 2e-29
Identities = 173/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| ||||| || | || ||||| | ||||| || || || || || || || |
Sbjct 6268 TTTGCATGCCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGT 6327
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || |||||||| | ||| |||||||| || || |||||||||||||
Sbjct 6328 AGTCCGAAAGGGTGCGGCCATCTTCCAATTGCTTTCCAGCGAAAATGAGACGTTGCTGAT 6387
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || || || || || || ||||| || || || || ||||| ||||| | || || |
Sbjct 6388 CTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCGGAGG 6447
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| ||||| || || |||| ||||| || || || || ||||| || ||||||||
Sbjct 6448 GCTCAACCTCCAGCGTAATGGTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCAT 6502
Score = 140 bits (154), Expect = 1e-27
Identities = 172/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| ||||| || | | ||||| | ||||| || || || || || || || |
Sbjct 6040 TTTGCATGCCACCGCGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGT 6099
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | ||||| ||||||||||| || || || |||||||| ||||| |||||||
Sbjct 6100 AGTCGGAAAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGAT 6159
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| || || || ||||| || || || || ||||| || |||| || ||||
Sbjct 6160 CTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGATG 6219
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || ||||| |||| || || || || || || || || || || |||||
Sbjct 6220 GCTCCACCTCAAGGGTAATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 6274
>seq22190
Length=927835
Score = 134 bits (148), Expect = 4e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | || || | ||| | ||| ||||| || || || || || || ||
Sbjct 837751 CCACCACGCAGACGCAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 837692
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
|| || || || || || | || || ||||||||||| | ||| ||||| || || |||
Sbjct 837691 AAGGTGCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 837632
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
|| ||||| || ||||| |||||||| || || || ||||| | ||| || || || ||
Sbjct 837631 ATGCCTTCCTTGTCCTGGATTTTAGCCTTCACGTTCTCAATGGTATCGGAGGGCTCGACC 837572
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | ||||| || || || || || ||||| ||||||||
Sbjct 837571 TCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 837525
Score = 129 bits (142), Expect = 2e-24
Identities = 168/231 (73%), Gaps = 1/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| |||||||| | | || || | || || |||||||| || || || || || ||
Sbjct 837527 CATGCCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTC 837468
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| || || || || || || | || || ||||||||||| | ||| ||||| || ||
Sbjct 837467 GGACAAGGTGCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGG 837408
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| ||||| || ||||| |||||||| || || || || || | ||| || || ||
Sbjct 837407 GGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTCACGTTCTCGATGGTATCGGAGGGCTC 837348
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || | ||||| || || || || || ||||| ||||||||
Sbjct 837347 GACCTCAAG-GTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 837298
>seq22266
Length=384576
Score = 131 bits (144), Expect = 5e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
||||||||||| | | || || |||||||| || ||||| || || || || || ||
Sbjct 109154 ATACCACCACGCAGGCGGAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCC 109213
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
|| | || || ||||| || || || || || || ||||| ||||| |||||||| ||
Sbjct 109214 GACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 109273
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
||||| || || || ||||| || || || || ||||| || || | || || || ||
Sbjct 109274 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCC 109333
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || | || | ||||| ||||| || ||||| || ||||| |||||
Sbjct 109334 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 109383
>seq19466
Length=61955
Score = 107 bits (118), Expect = 6e-18
Identities = 243/364 (67%), Gaps = 5/364 (1%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
||||| || || || | |||||| | | || |||||||||| || || || ||| |
Sbjct 32574 CCCGAGGAGATCTCCGCCATGGTTCTGGGCAAGATGAAGGAAACCGCCGAGGCTTATCTG 32515
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|| | | || || | || || | ||||| |||||||| || || ||||||||||||
Sbjct 32514 GGCAAGAAGGTTACCCACGCCGTCGTCACTGTGCCAGCCTACTTCAACGATGCCCAGCGT 32455
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || |||||||| |||||| || | | || | | || || || |||
Sbjct 32454 CAGGCCACCAAGGATGCTGGTGTCATTGCCGGTCTGCAGGTGATGCGCATCATCAACGAA 32395
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTAT 349770
||||||||||| || ||||| ||||| || || || || ||| | || || || |
Sbjct 32394 CCCACTGCTGCGGCTATTGCCTATGGTCTGGACAAGAAGGAGGG----TGAGAAGAACGT 32339
Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830
|| | || ||| | || || || || || ||||| || || || || | || | ||
Sbjct 32338 GCTGGTGTTCGATCTGGGCGGCGGCACCTTCGATGTCTCTCTGCTGACCATCGATAACGG 32279
Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890
| | ||||| || || || ||||| || ||| | || || || || || ||| |
Sbjct 32278 AGTATTTGAGGTGGTGGCCACCAACGGTGACACCCATTTGGGCGGTGAGGACTTCGATCA 32219
Query 349891 TCGT 349894
|||
Sbjct 32218 GCGT 32215
>seq21441
Length=81305
Score = 87.8 bits (96), Expect = 5e-12
Identities = 445/706 (63%), Gaps = 10/706 (1%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| ||||||||||| || || || || || || || | ||| | ||| |||
Sbjct 80736 GCTATTGGAATCGATTTGGGCACCACGTACTCCTGCGTGGGTGTCTACCAACATGGCAAG 80677
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| ||||| || || || || ||||| ||| | || || || || ||||| || || ||
Sbjct 80676 GTGGAAATCATCGCCAACGACCAAGGCAACCGCACCACCCCGTCCTACGTGGCCTTCACA 80617
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| | ||||| | || || ||| | ||||||||||| | || ||||| | ||
Sbjct 80616 GACTCGGAGCGCCTCATCGGCGATCCCGCAAAAAATCAGGTGGCCATGAATCCCAGGAAC 80557
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAAT 349436
||||| || || || || || || || ||| | | | ||| | || | | |
Sbjct 80556 ACGGTGTTCGACGCCAAACGTCTCATCGGTCGCAAGTACGATGACCCTAAGATCGTCGA- 80498
Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496
|| | || || | || || | || || | || || | || || | || |
Sbjct 80497 -GGACATGAAGCACTGGCCATTCAAGGTGGT---GAGCGATGGCGGAAAGCCCAAGATCG 80442
Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556
|||||||| | || || || | || ||||| ||||| || |||||
Sbjct 80441 GGGTTGAATTCAGGGGCGAGGCCAAGCGGTTCGCCCCCGAGGAAATCAGCTCGATGGTGC 80382
Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616
| || ||||| || | || || |||||| | || || | | || || || || |
Sbjct 80381 TGACCAAGATGAAAGAGACAGCGGAGGCATATCTTGGCGAGAGCATCACGGACGCCGTGA 80322
Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676
| || || || ||||| || || || ||||||| || || ||||| || ||| ||
Sbjct 80321 TCACAGTCCCTGCCTACTTCAACGACTCCCAGCGCCAGGCCACTAAAGACGCCGGCCACA 80262
Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736
|||| || | || || || | || || || || ||||| || || ||| | || || |
Sbjct 80261 TTGCCGGCCTGAACGTGCTCCGTATCATCAACGAGCCCACGGCGGCGGCATTGGCCTACG 80202
Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796
| | || |||| | | || || | || || || || | || || ||||
Sbjct 80201 GCTTGGACAAAAACCTTAAGGGGGAGCGGAACGTACTCATCTTCGACCTGGGAGGCGGTA 80142
Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCAACTG 349853
| |||||||| || ||||||| | || |||||| | || || || | ||||
Sbjct 80141 CCTTTGATGTCTCCATACTAACCATCGACGAGGGATCGCTATTCGAGGTCCGTTCTACTG 80082
Query 349854 CTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899
| || || || ||||| || || ||||| || || || || || ||
Sbjct 80081 CCGGAGACACCCATCTGGGCGGTGAAGACTTCGACAACCGGCTGGT 80036
>seq18989
Length=91568
Score = 87.8 bits (96), Expect = 5e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 235885 TATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGAT 235944
||| ||||||||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||
Sbjct 63546 TATCGGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACGGGGAT 63487
Query 235945 CAAAACCCAGCATCTCCA 235962
| | ||| |||||||||
Sbjct 63486 CGATGCCCCGCATCTCCA 63469
>seq21443
Length=22644
Score = 86.0 bits (94), Expect = 2e-11
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| ||||||||||| || || || || || || || | ||| | ||| |||
Sbjct 7388 GCTATTGGAATCGATTTGGGCACCACGTACTCCTGCGTGGGTGTCTACCAACATGGCAAG 7329
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| ||||| || || || || ||||| ||| | || || || || ||||| || || ||
Sbjct 7328 GTGGAAATCATCGCCAACGACCAAGGCAACCGCACCACCCCGTCCTACGTGGCCTTCACA 7269
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| | ||||| | || || ||| | ||||||||||| | || ||||| | ||
Sbjct 7268 GACTCGGAGCGCCTCATCGGCGATCCCGCAAAAAATCAGGTGGCCATGAATCCCAGGAAC 7209
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGT 349408
||||| || || || || || || || |||
Sbjct 7208 ACGGTGTTCGACGCCAAACGTCTCATCGGT 7179
Score = 86.0 bits (94), Expect = 2e-11
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| ||||||||||| || || || || || || || | ||| | ||| |||
Sbjct 9551 GCTATTGGAATCGATTTGGGCACCACGTACTCCTGCGTGGGTGTCTACCAACATGGCAAG 9610
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| ||||| || || || || ||||| ||| | || || || || ||||| || || ||
Sbjct 9611 GTGGAAATCATCGCCAACGACCAAGGCAACCGCACCACCCCGTCCTACGTGGCCTTCACA 9670
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| | ||||| | || || ||| | ||||||||||| | || ||||| | ||
Sbjct 9671 GACTCGGAGCGCCTCATCGGCGATCCCGCAAAAAATCAGGTGGCCATGAATCCCAGGAAC 9730
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGT 349408
||||| || || || || || || || |||
Sbjct 9731 ACGGTGTTCGACGCCAAACGTCTCATCGGT 9760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1514811387438657
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |