Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq20501 168 2e-36 seq2591 165 2e-35 seq5502 158 4e-33 seq22190 134 4e-26 seq22266 131 5e-25 seq19466 107 6e-18 seq21441 87.8 5e-12 seq18989 87.8 5e-12 seq21443 86.0 2e-11 >seq20501 Length=31302 Score = 168 bits (186), Expect = 2e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | || | ||| ||||| || ||||| ||||| ||||| Sbjct 11116 ACCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGA 11175 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||| || || || ||||| ||||| ||||| |||||||| ||||| Sbjct 11176 GAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 11235 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 |||||||||||| |||||||| || ||||| ||||| || || | || || ||||| || Sbjct 11236 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGACGGTTCGAC 11295 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || || |||||||| Sbjct 11296 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 11343 >seq2591 Length=155389 Score = 165 bits (182), Expect = 2e-35 Identities = 512/787 (65%), Gaps = 4/787 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || || ||| | || || ||||| || |||||| ||| | || || || ||||| Sbjct 130588 CCGGAGGAAGTGTCCTCGATGGTGTTGACCAAAATGCGGGAGACGGCAGAGGCCTATTTG 130529 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 |||| | || || || || ||| | || || || |||||||| || || ||||||| Sbjct 130528 GGTGGCTCTGTCACAGACGCGGTTGTCACGGTTCCGGCCTATTTCAACGACTCCCAGCGA 130469 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| ||| |||||| || || ||||| || | || || || ||| Sbjct 130468 CAGGCCACCAAGGATGCGGGCGCCATTGCCGGCTTGAATGTCCTTCGCATCATCAACGAA 130409 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA-GaaaaaaaTAT 349770 ||||| || || || ||||| || || | |||||| | | |||| || ||| | Sbjct 130408 CCCACGGCGGCGGCCATTGCCTACGGATTGGATAAACAGGGC-ACCAGTGAGCGGAATGT 130350 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 || || || ||| | || ||||| ||||| || ||||| | || || |||| || || Sbjct 130349 CCTGATCTTCGATCTCGGCGGTGGCACTTTCGACGTATCCGTGCTGACCATTGAGGATGG 130290 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 || ||||| || || || || ||||| || || ||||||||||| || || ||||| || Sbjct 130289 CATCTTTGAGGTGAAGGCCACCGCTGGGGACACTCATCTTGGTGGCGAGGACTTTGACAA 130230 Query 349891 TCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAG 349949 || || || || || || | || || |||| ||||| || |||| | || Sbjct 130229 CCGACTGGTGAACCACTTCGTGCAGGAGTTCCAGCG-CAAGCACAAGCGTGATCTGGGCC 130171 Query 349950 ATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTAT 350009 | ||| | ||| || | || || |||| || |||||||| || ||||| || | | Sbjct 130170 AAAATAAGCGGGCACTGAGACGTCTGCGAACCGCCTGTGAACGGGCCAAGCGGACCCTCT 130111 Query 350010 CATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTT 350069 | ||| | || || || || || || || || || || ||| || |||| Sbjct 130110 CCTCTTCCACACAGGCCAGCATCGAGATCGACTCGCTCTTCGAGGGCGTTGACTTCTACA 130051 Query 350070 CATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGG 350129 | || | ||||| || || || || || || |||||| ||| | | || |||| Sbjct 130050 CCTCGGTGACACGCGCCCGTTTCGAGGAGTTGAACGGGGATCTGTTTCGGGGCACCATGG 129991 Query 350130 ATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAG 350189 | || |||| || | | ||||| || ||| || ||||| | || | | Sbjct 129990 AGCCGGTGGCCAAGGCGCTGCGCGATGCCAAGATGGATAAGGGCCAGATCCACGACATCG 129931 Query 350190 TTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTA 350249 || | || || || || || | || || || || || | ||||| || || || | Sbjct 129930 TTCTGGTGGGCGGCTCAACCAGGATACCCAAGGTGCAGCGTTTACTGCAGGACTTCTTCA 129871 Query 350250 ATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTG 350309 | ||||| || | | || || ||||| ||||| || || || || || || || | Sbjct 129870 ACGGCAAGGAGCTGAACAAGTCCATCAATCCCGATGAGGCGGTGGCCTACGGAGCCGCAG 129811 Query 350310 TTCAGGC 350316 | ||||| Sbjct 129810 TGCAGGC 129804 >seq5502 Length=68615 Score = 158 bits (174), Expect = 4e-33 Identities = 176/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | ||||| | ||||| || || || || || || || | Sbjct 6952 TTTGCATGCCACCGCGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGT 7011 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || |||||||| | || |||||||| || || ||||| ||||||| Sbjct 7012 AGTCCGAAAGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGAT 7071 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || |||||||| || ||||||||||| ||||| || ||||| ||||| | ||||||| Sbjct 7072 CTGGGGGAATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATG 7131 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| ||||| | || | ||||||||||| | || ||||| || || ||||| Sbjct 7132 GTTCGACTTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 7186 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || | || ||||| | ||||| || || || || || || || || || Sbjct 6500 CATGCCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTC 6559 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||| | || |||||||| || || ||||| |||||||| || Sbjct 6560 GGAAAGGGTGCGGCCATCTTCCAACTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGG 6619 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||| || ||||||||||| ||||| || ||||| ||||| | |||||||| || Sbjct 6620 GGGAATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATGGTGTCAGATGGCTC 6679 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || | || |||||||| | || ||||| || || ||||| Sbjct 6680 CACTTCGAGAGTGATGGTTTTTCCGGTCAAGGTCTTTACGAAGATTTGCAT 6730 Score = 150 bits (166), Expect = 5e-31 Identities = 175/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | || || | ||||| || || || || || || || | Sbjct 7180 TTTGCATGCCACCGCGAAGACGGAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGT 7239 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | ||||| ||||||||||| || || || |||||||| ||||| ||||| | Sbjct 7240 AGTCGGAAAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGT 7299 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| || || ||||||||||| || || |||||||| || |||| ||| || | Sbjct 7300 CTGGGGGAATGCCCTCCTTATCCTGAATCTTGGCCTTTACATTCTCGATCGTATCGGAAG 7359 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || | |||| ||||| || || | ||| || ||||| ||||||||| Sbjct 7360 GCTCCACCTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCATT 7415 Score = 145 bits (160), Expect = 2e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | || ||||| | ||||| || || || || || || || | Sbjct 6268 TTTGCATGCCACCGCGGAGTCGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGT 6327 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || |||||||| | ||| |||||||| || || ||||||||||||| Sbjct 6328 AGTCCGAAAGGGTGCGGCCATCTTCCAATTGCTTTCCAGCGAAAATGAGACGTTGCTGAT 6387 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || || || || ||||| || || || || ||||| ||||| | || || | Sbjct 6388 CTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCGGAGG 6447 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || |||| ||||| || || || || ||||| || |||||||| Sbjct 6448 GCTCAACCTCCAGCGTAATGGTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCAT 6502 Score = 140 bits (154), Expect = 1e-27 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | ||||| | ||||| || || || || || || || | Sbjct 6040 TTTGCATGCCACCGCGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGT 6099 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | ||||| ||||||||||| || || || |||||||| ||||| ||||||| Sbjct 6100 AGTCGGAAAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGAT 6159 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| || || || ||||| || || || || ||||| || |||| || |||| Sbjct 6160 CTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGATG 6219 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || ||||| |||| || || || || || || || || || || ||||| Sbjct 6220 GCTCCACCTCAAGGGTAATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 6274 >seq22190 Length=927835 Score = 134 bits (148), Expect = 4e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | ||| | ||| ||||| || || || || || || || Sbjct 837751 CCACCACGCAGACGCAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 837692 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 || || || || || || | || || ||||||||||| | ||| ||||| || || ||| Sbjct 837691 AAGGTGCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 837632 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || ||||| || ||||| |||||||| || || || ||||| | ||| || || || || Sbjct 837631 ATGCCTTCCTTGTCCTGGATTTTAGCCTTCACGTTCTCAATGGTATCGGAGGGCTCGACC 837572 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || ||||| |||||||| Sbjct 837571 TCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 837525 Score = 129 bits (142), Expect = 2e-24 Identities = 168/231 (73%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || | || || |||||||| || || || || || || Sbjct 837527 CATGCCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTC 837468 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || || || || | || || ||||||||||| | ||| ||||| || || Sbjct 837467 GGACAAGGTGCGTCCGTCCTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGG 837408 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| |||||||| || || || || || | ||| || || || Sbjct 837407 GGGAATGCCTTCCTTGTCCTGGATTTTAGCCTTCACGTTCTCGATGGTATCGGAGGGCTC 837348 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| || || || || || ||||| |||||||| Sbjct 837347 GACCTCAAG-GTGATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 837298 >seq22266 Length=384576 Score = 131 bits (144), Expect = 5e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || |||||||| || ||||| || || || || || || Sbjct 109154 ATACCACCACGCAGGCGGAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCC 109213 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || || || || || || ||||| ||||| |||||||| || Sbjct 109214 GACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 109273 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| || || || ||||| || || || || ||||| || || | || || || || Sbjct 109274 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCC 109333 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | || | ||||| ||||| || ||||| || ||||| ||||| Sbjct 109334 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAAATTTGCAT 109383 >seq19466 Length=61955 Score = 107 bits (118), Expect = 6e-18 Identities = 243/364 (67%), Gaps = 5/364 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| || || || | |||||| | | || |||||||||| || || || ||| | Sbjct 32574 CCCGAGGAGATCTCCGCCATGGTTCTGGGCAAGATGAAGGAAACCGCCGAGGCTTATCTG 32515 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || || | || || | ||||| |||||||| || || |||||||||||| Sbjct 32514 GGCAAGAAGGTTACCCACGCCGTCGTCACTGTGCCAGCCTACTTCAACGATGCCCAGCGT 32455 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || |||||||| |||||| || | | || | | || || || ||| Sbjct 32454 CAGGCCACCAAGGATGCTGGTGTCATTGCCGGTCTGCAGGTGATGCGCATCATCAACGAA 32395 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTAT 349770 ||||||||||| || ||||| ||||| || || || || ||| | || || || | Sbjct 32394 CCCACTGCTGCGGCTATTGCCTATGGTCTGGACAAGAAGGAGGG----TGAGAAGAACGT 32339 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 || | || ||| | || || || || || ||||| || || || || | || | || Sbjct 32338 GCTGGTGTTCGATCTGGGCGGCGGCACCTTCGATGTCTCTCTGCTGACCATCGATAACGG 32279 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 | | ||||| || || || ||||| || ||| | || || || || || ||| | Sbjct 32278 AGTATTTGAGGTGGTGGCCACCAACGGTGACACCCATTTGGGCGGTGAGGACTTCGATCA 32219 Query 349891 TCGT 349894 ||| Sbjct 32218 GCGT 32215 >seq21441 Length=81305 Score = 87.8 bits (96), Expect = 5e-12 Identities = 445/706 (63%), Gaps = 10/706 (1%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| ||||||||||| || || || || || || || | ||| | ||| ||| Sbjct 80736 GCTATTGGAATCGATTTGGGCACCACGTACTCCTGCGTGGGTGTCTACCAACATGGCAAG 80677 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || || || ||||| ||| | || || || || ||||| || || || Sbjct 80676 GTGGAAATCATCGCCAACGACCAAGGCAACCGCACCACCCCGTCCTACGTGGCCTTCACA 80617 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | ||||| | || || ||| | ||||||||||| | || ||||| | || Sbjct 80616 GACTCGGAGCGCCTCATCGGCGATCCCGCAAAAAATCAGGTGGCCATGAATCCCAGGAAC 80557 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAAT 349436 ||||| || || || || || || || ||| | | | ||| | || | | | Sbjct 80556 ACGGTGTTCGACGCCAAACGTCTCATCGGTCGCAAGTACGATGACCCTAAGATCGTCGA- 80498 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 || | || || | || || | || || | || || | || || | || | Sbjct 80497 -GGACATGAAGCACTGGCCATTCAAGGTGGT---GAGCGATGGCGGAAAGCCCAAGATCG 80442 Query 349497 AGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTT 349556 |||||||| | || || || | || ||||| ||||| || ||||| Sbjct 80441 GGGTTGAATTCAGGGGCGAGGCCAAGCGGTTCGCCCCCGAGGAAATCAGCTCGATGGTGC 80382 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || ||||| || | || || |||||| | || || | | || || || || | Sbjct 80381 TGACCAAGATGAAAGAGACAGCGGAGGCATATCTTGGCGAGAGCATCACGGACGCCGTGA 80322 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || || || ||||| || || || ||||||| || || ||||| || ||| || Sbjct 80321 TCACAGTCCCTGCCTACTTCAACGACTCCCAGCGCCAGGCCACTAAAGACGCCGGCCACA 80262 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || | || || || | || || || || ||||| || || ||| | || || | Sbjct 80261 TTGCCGGCCTGAACGTGCTCCGTATCATCAACGAGCCCACGGCGGCGGCATTGGCCTACG 80202 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | | || |||| | | || || | || || || || | || || |||| Sbjct 80201 GCTTGGACAAAAACCTTAAGGGGGAGCGGAACGTACTCATCTTCGACCTGGGAGGCGGTA 80142 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCAACTG 349853 | |||||||| || ||||||| | || |||||| | || || || | |||| Sbjct 80141 CCTTTGATGTCTCCATACTAACCATCGACGAGGGATCGCTATTCGAGGTCCGTTCTACTG 80082 Query 349854 CTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899 | || || || ||||| || || ||||| || || || || || || Sbjct 80081 CCGGAGACACCCATCTGGGCGGTGAAGACTTCGACAACCGGCTGGT 80036 >seq18989 Length=91568 Score = 87.8 bits (96), Expect = 5e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 235885 TATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGAT 235944 ||| ||||||||||| ||| ||||||| ||||||||| ||||| ||||||||| ||||| Sbjct 63546 TATCGGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACGGGGAT 63487 Query 235945 CAAAACCCAGCATCTCCA 235962 | | ||| ||||||||| Sbjct 63486 CGATGCCCCGCATCTCCA 63469 >seq21443 Length=22644 Score = 86.0 bits (94), Expect = 2e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| ||||||||||| || || || || || || || | ||| | ||| ||| Sbjct 7388 GCTATTGGAATCGATTTGGGCACCACGTACTCCTGCGTGGGTGTCTACCAACATGGCAAG 7329 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || || || ||||| ||| | || || || || ||||| || || || Sbjct 7328 GTGGAAATCATCGCCAACGACCAAGGCAACCGCACCACCCCGTCCTACGTGGCCTTCACA 7269 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | ||||| | || || ||| | ||||||||||| | || ||||| | || Sbjct 7268 GACTCGGAGCGCCTCATCGGCGATCCCGCAAAAAATCAGGTGGCCATGAATCCCAGGAAC 7209 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGT 349408 ||||| || || || || || || || ||| Sbjct 7208 ACGGTGTTCGACGCCAAACGTCTCATCGGT 7179 Score = 86.0 bits (94), Expect = 2e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| ||||||||||| || || || || || || || | ||| | ||| ||| Sbjct 9551 GCTATTGGAATCGATTTGGGCACCACGTACTCCTGCGTGGGTGTCTACCAACATGGCAAG 9610 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| || || || || ||||| ||| | || || || || ||||| || || || Sbjct 9611 GTGGAAATCATCGCCAACGACCAAGGCAACCGCACCACCCCGTCCTACGTGGCCTTCACA 9670 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | ||||| | || || ||| | ||||||||||| | || ||||| | || Sbjct 9671 GACTCGGAGCGCCTCATCGGCGATCCCGCAAAAAATCAGGTGGCCATGAATCCCAGGAAC 9730 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGT 349408 ||||| || || || || || || || ||| Sbjct 9731 ACGGTGTTCGACGCCAAACGTCTCATCGGT 9760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514811387438657