Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_028878.1 Length=76271 Score E Sequences producing significant alignments: (Bits) Value seq177 95.1 6e-15 >seq177 Length=13841 Score = 95.1 bits (104), Expect = 6e-15 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 66123 ATGGGTGCCCCCACAAGGGATCGAACCTTGGACCCGATGATTAAAAGTCACCTGCTCTAC 66182 || |||| | |||||||| |||||||||||||||| ||||||| ||||| ||||||||| Sbjct 5293 ATTGGTGGGCGCACAAGGGCTCGAACCTTGGACCCGCTGATTAAGAGTCAGCTGCTCTAC 5234 Query 66183 CAACTGAGCTAT 66194 |||||||||||| Sbjct 5233 CAACTGAGCTAT 5222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243874558017688