Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_028904.1 Length=49452 Score E Sequences producing significant alignments: (Bits) Value seq22175 80.6 8e-11 >seq22175 Length=384841 Score = 80.6 bits (88), Expect = 8e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 23567 GGCTGGTCCGGCATCGGCTACAACTTCGTGGTCGACCAGGACGGCAACATCTACGAGGGC 23626 |||||| ||| |||||||||||||||| || ||| | ||||||||| | ||||||||| Sbjct 151971 GGCTGGCCCGACATCGGCTACAACTTCCTGATCGGCGGAGACGGCAACGTGTACGAGGGC 152030 Query 23627 CGTGGCTGG 23635 ||||||||| Sbjct 152031 CGTGGCTGG 152039 Score = 80.6 bits (88), Expect = 8e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 23567 GGCTGGTCCGGCATCGGCTACAACTTCGTGGTCGACCAGGACGGCAACATCTACGAGGGC 23626 |||||| ||| |||||||||||||||| || ||| | ||||||||| | ||||||||| Sbjct 158968 GGCTGGCCCGACATCGGCTACAACTTCCTGATCGGCGGAGACGGCAACGTGTACGAGGGC 159027 Query 23627 CGTGGCTGG 23635 ||||||||| Sbjct 159028 CGTGGCTGG 159036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158081952033492