Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20rhopaloa_20[refseq_20GCF_5F000236305.1_202013-02-22] 22,819 sequences; 197,375,704 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq22228 84.2 2e-11 >seq22228 Length=358660 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 103377 GTTGCCCAAATCGCCAACGTGTCTGACGAGCGCGTCGGGCGCGCCGTGCGTTTCGCCGGT 103436 |||||||| |||||| | ||| | | | || |||| ||||||||| | |||| Sbjct 288151 GTTGCCCAGATCGCCCAGGTGGCGGTCCTCGTCGGCGGGGGCGCCGTGCTCCTTGCCGTA 288092 Query 103437 GGGATTAAAATGTTCGCCGGCCGACGTGCAGCCGTTGCTTGTGTCGCCAAACTCGTGCAC 103496 ||||| || || |||| ||| ||||||||||| | |||| || ||||||||||| Sbjct 288091 AGGATTGAAGTGCGGCCCGGATGACATGCAGCCGTTGGTGTTGTCACCGAACTCGTGCAC 288032 Query 103497 GTGAAAACCGTGCAATCCTTTGGGCA 103522 ||| || ||||||| || |||| || Sbjct 288031 GTGGAATCCGTGCAGACCCTTGGCCA 288006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409546870643121