Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1553 228 1e-54
>seq1553
Length=5866729
Score = 228 bits (252), Expect = 1e-54
Identities = 515/764 (67%), Gaps = 30/764 (4%)
Strand=Plus/Plus
Query 145589 CAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCC---TCAGGATCCTGAGCC 145645
||||||| || | |||||| || ||||||| |||| | | | | |||| |||
Sbjct 1124530 CAAAGTCTTCGAAGCGGAAGTCCTCGATGTCCTGCACCTGACGTTTAATGATC---AGCT 1124586
Query 145646 TGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGT 145705
|||||||||| || || | | ||| || |||||| ||||| |||||||| ||||
Sbjct 1124587 TGGGAAAGGGTCGCGGTGTGCGCTGCAGTTGCTCCTTCAGCGGCTCTACGTGGTTCAGGT 1124646
Query 145706 AGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGG 145765
||||||| | || |||| | ||| | ||||| || |||| || ||||| | ||||
Sbjct 1124647 AGACGTGTGTATCGCCCATGGTGTGAACAAAGTCGCCCGGCTTCAGACCCGTCACATGGG 1124706
Query 145766 CGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGT 145825
| | ||||| ||| ||||||| |||| ||| ||||| ||||| || ||||| |||||||
Sbjct 1124707 CAATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTTAAAGGGTACGCCCAGGCCCATGT 1124766
Query 145826 CCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGC------CCGCCACGTAGAACT 145879
| | | ||||||||||||||| || ||||| |||| | | ||||| ||||
Sbjct 1124767 CGGCGCTTCTCTGGTACAGCTGGCACGACAGCTCACCGCGCTTCTCGGAGACGTAAAACT 1124826
Query 145880 GGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGG 145939
| || | |||||| |||||||||||||| || | |||| ||| ||||| || |
Sbjct 1124827 GCGCCAAGCAGTGGCACGGCGGCAGGGCCATCTTTGGGATGTCCAGCGGATTCCAAGCCG 1124886
Query 145940 TGAGGACGA-GCCTCCTGCTCT-CGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAG 145997
| || || || || | ||| ||| || || |||| | |||| | | ||
Sbjct 1124887 ACATGATGATGCGTC--GGTCTGAGGGCTTATTCCTGATGGTGTCGATCACTTGGCGCAG 1124944
Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTC-TTGGAGTCCACGTACGCGGCCCCGAAGT 146056
|||||| | ||||| || | ||| | | || | | || ||||| |||||||| |
Sbjct 1124945 CTGGTCGATGCCCTTGCCGCTGTAGT-TATCGTCGCAGGTGCCGTACTGCGCCCCGAAAT 1125003
Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC--GGGCTC--CCTGTG--CCCCA 146110
||||||||||||| ||||| || || ||||| || || | ||| || ||| |||||
Sbjct 1125004 GCCTCCACTGGAAGCCGTACACCGGGCCCAGATCGCCAACGACTCGGCCCGTGAACCCCA 1125063
Query 146111 GCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCG 146170
| | || ||||| || | ||| | ||| | |||||||| | || | |||
Sbjct 1125064 TCTTGTCC------AGGAATTCTCTGGAGCTGTTCCCATCCCAGATGTGCACATTCTTCG 1125117
Query 146171 CGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCC 146230
| ||| |||| |||||| || | |||||| |||||||| || |||
Sbjct 1125118 CCTGCAGCAGTTTGGCGTCCGTCTTGCCTGCCACGAACCACAGCAGCTCCTCTGCCACCG 1125177
Query 146231 CCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGCAGGGAGTACTTGG 146290
| | ||||||| | ||| |||||||| ||||| || | ||||| | | |
Sbjct 1125178 CGCGGAAGAAGACACGCTTCGTGGTCAGGAGGGGAAAGGAGTTCCGCATGTCGAAGCGCA 1125237
Query 146291 CCTGGTCCCCGAAGACGGACAGGGTGCCCACGCCCGTCCTGTCC 146334
||| ||||| |||||||| |||||||| |||| | ||||
Sbjct 1125238 TCTGACTGCCGAACACGGACAGAGTGCCCACCTCCGTGCGGTCC 1125281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589968144733240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |