Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1557 506 2e-138
seq1553 140 3e-28
seq1556 132 5e-26
seq1555 131 2e-25
seq1554 125 7e-24
seq1558 111 2e-19
>seq1557
Length=14215200
Score = 506 bits (560), Expect = 2e-138
Identities = 562/746 (75%), Gaps = 8/746 (1%)
Strand=Plus/Minus
Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714
|||| ||||| || ||||||||||||||||||||||| ||||||||||| | ||||
Sbjct 5422487 AGGCTGAGGCTTCTTTCTGGACCGTCGAGGAGGTGGATTTGTCCAAGGACCTTACTGACT 5422428
Query 116715 GGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCG 116774
|| | ||| |||| ||| ||||||||||||||||| ||||||||||||||| |||||||
Sbjct 5422427 GGCACCGCCTGAAGGACGACGAGCGCCATTTCATCTCGCACGTGCTGGCCTTCTTCGCCG 5422368
Query 116775 CCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGG 116834
|| || |||||||| |||||||| ||||| ||||| ||| ||||||||||||| |
Sbjct 5422367 CCTCTGATGGCATCGTAAACGAGAACCTGGTGGAGCGCTTCAGTCAGGAGGTGCAGATCA 5422308
Query 116835 CCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGT 116894
| ||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 5422307 CGGAGGCACGATGCTTCTACGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 5422248
Query 116895 ATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAG---AAGCTCCGTTTGTTGA 116951
| | |||||||| ||| | || | | | || || || |||| |
Sbjct 5422247 ACAGTGTTTTGATCGACACTTACATCCGGGATCCACACCAGCGAGAGTACC---TGTTCA 5422191
Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011
|||| ||||| ||||||||| || || ||||| || ||||| ||| |||||||
Sbjct 5422190 ACGCTATCGAAACGATGCCGGCTGTGAAGCGCAAGGCAGACTGGGCCCTGTCCTGGATCT 5422131
Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071
| || |||| ||||| |||||| | | ||||| || ||||| |||||| | |
Sbjct 5422130 CATCCAAGTCGGCCAATTTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGAGGGCATTT 5422071
Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131
|||| ||||| |||||| |||| || ||||| ||||| ||||| || ||||| ||
Sbjct 5422070 TCTTCAGCGGCAGCTTCGCCTCCATTTTCTGGCTTAAGAAGCGCGGTCTGATGCCTGGAT 5422011
Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191
|||| ||| ||||||||| ||||| | |||||||| |||| ||||||||||||
Sbjct 5422010 TGACCTTCTCCAACGAGCTGATCTCTCGCGACGAGGGCTTGCACTGCGACTTTGCCGTGC 5421951
Query 117192 TGCTGTTCAAGCATTTGGTGCAGCGA-CCGAGCGCGGCGCGCGTCAGGGAGATCGTCACC 117250
|| ||||| |||| ||||||||||| || ||||| | |||| ||| |||||| || |
Sbjct 5421950 TGATGTTCCAGCACCTGGTGCAGCGACCCAAGCGC-GAGCGCATCATCGAGATCATCCGC 5421892
Query 117251 GACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGA 117310
|||||||| ||||| |||||| ||||||||||| || ||||| || | || | ||
Sbjct 5421891 GACGCGGTGGCCATAGAGCAGGAGTTCCTCACCGATGCCCTGCCCGTCAATTTGATCGGC 5421832
Query 117311 CTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAG 117370
| |||||||| |||||| || ||||| |||||||| || ||| | |||| | |||
Sbjct 5421831 ATGAATTGCGACCTGATGTCCCAGTACATTGAGTTCGTAGCGGACCGTTTGCTCGTGGAG 5421772
Query 117371 CTGGTCGGCGCCAAGCACTACAACAC 117396
||| || | ||| |||||||||
Sbjct 5421771 TTGGGCGTTGGAAAGATCTACAACAC 5421746
>seq1553
Length=5866729
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| ||||| ||||| ||||||||| | || || || | |
Sbjct 2325259 ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCT 2325318
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | || || |||||||| ||| | || |||
Sbjct 2325319 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCAG 2325378
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||||||||| |||||||| || | ||||| || ||||||||||
Sbjct 2325379 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCCGACTACAAC 2325438
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| | || ||||| | ||| | ||| || | || ||
Sbjct 2325439 ATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGCCTGCGTGGTGG 2325485
>seq1556
Length=7591821
Score = 132 bits (146), Expect = 5e-26
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| |||||||| | || || || |||| |
Sbjct 3895027 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGA-GCCATC 3894969
Query 40750 G-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
| ||| | | | | | |||| || |||| || || ||||| |||||| | || ||
Sbjct 3894968 GGACACCATTGAGAATGTGAAGGCTAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCA 3894909
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| |||||||| ||||| |||| |||||||| ||| |||||
Sbjct 3894908 GCAGCGTCTCATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTTTCCGATTACAA 3894849
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| | || || || || ||
Sbjct 3894848 CATCCAGAAGGAGTCGACCCTTCACCTGGT 3894819
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| |||||||| | || || || |||| |
Sbjct 3894571 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGA-GCCATC 3894513
Query 40750 G-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
| ||| | | | | | |||| || || | ||||| |||||||||||| | || ||
Sbjct 3894512 GGACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGCATCCCCCCAGATCA 3894453
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| |||||||| ||||| |||| |||||||| ||| |||||
Sbjct 3894452 GCAGCGTCTCATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTTTCCGATTACAA 3894393
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||| ||||||||| | || || ||
Sbjct 3894392 CATTCAGAAGGAGTCGACCCTTCA 3894369
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| |||||||| | || || || |||| |
Sbjct 3895255 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGA-GCCATC 3895197
Query 40750 G-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
| ||| | | | | | |||| || || | ||||| |||||||||||| | || ||
Sbjct 3895196 GGACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGCATCCCCCCAGATCA 3895137
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| |||||||| ||||| |||| |||||||| ||| |||||
Sbjct 3895136 GCAGCGTCTCATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTTTCCGATTACAA 3895077
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||| ||||||||| | || || ||
Sbjct 3895076 CATTCAGAAGGAGTCGACCCTTCA 3895053
Score = 127 bits (140), Expect = 2e-24
Identities = 152/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| |||||||| | || || || |||| |
Sbjct 3892975 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGA-GCCATC 3892917
Query 40750 G-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
| ||| | | | | | |||| || |||| || || ||||| |||||| | || ||
Sbjct 3892916 GGACACCATTGAGAATGTGAAGGCTAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCA 3892857
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| ||||| || ||||| |||| |||||||| ||| |||||
Sbjct 3892856 GCAGCGTCTCATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTTTCCGATTACAA 3892797
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || || ||
Sbjct 3892796 CATCCAGAAGGAGTCGACCCTTCA 3892773
Score = 127 bits (140), Expect = 2e-24
Identities = 152/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| |||||||| | || || || |||| |
Sbjct 3893659 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGA-GCCATC 3893601
Query 40750 G-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
| ||| | | | | | |||| || |||| || || ||||| |||||| | || ||
Sbjct 3893600 GGACACCATTGAGAATGTGAAGGCTAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCA 3893541
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| ||||| || ||||| |||| |||||||| ||| |||||
Sbjct 3893540 GCAGCGTCTCATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTACAA 3893481
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || || ||
Sbjct 3893480 CATCCAGAAGGAGTCGACCCTTCA 3893457
Score = 127 bits (140), Expect = 2e-24
Identities = 152/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| |||||||| | || || || |||| |
Sbjct 3894343 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGA-GCCATC 3894285
Query 40750 G-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
| ||| | | | | | |||| || |||| || || ||||| |||||| | || ||
Sbjct 3894284 GGACACCATTGAGAATGTGAAGGCTAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCA 3894225
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| ||||| || ||||| |||| |||||||| ||| |||||
Sbjct 3894224 GCAGCGTCTCATCTTCGCCGGCAAGCAACTGGAGGACGGACGCACCCTTTCCGATTACAA 3894165
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || || ||
Sbjct 3894164 CATCCAGAAGGAGTCGACCCTTCA 3894141
Score = 120 bits (132), Expect = 3e-22
Identities = 151/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| |||||||| | || || || |||| |
Sbjct 3893431 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGA-GCCATC 3893373
Query 40750 G-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
| ||| | | | | | |||| ||||| | ||||| ||||| || ||| | || ||
Sbjct 3893372 GGACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGAATTCCCCCAGATCA 3893313
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| ||||| || |||| |||| |||||||| ||| |||||
Sbjct 3893312 GCAGCGTCTGATCTTCGCTGGCAAGCAATTGGAAGACGGACGCACCCTGTCCGATTACAA 3893253
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
||||||||||||| | || || |||
Sbjct 3893252 CATCCAGAAGGAGTCAACCCTCCAT 3893228
Score = 120 bits (132), Expect = 3e-22
Identities = 151/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| |||||||| | || || || |||| |
Sbjct 3894115 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGA-GCCATC 3894057
Query 40750 G-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
| ||| | | | | | |||| ||||| | ||||| ||||| || ||| | || ||
Sbjct 3894056 GGACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGAATTCCCCCAGATCA 3893997
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| ||||| || |||| |||| |||||||| ||| |||||
Sbjct 3893996 GCAGCGTCTGATCTTCGCTGGCAAGCAATTGGAAGACGGACGCACCCTGTCCGATTACAA 3893937
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
||||||||||||| | || || |||
Sbjct 3893936 CATCCAGAAGGAGTCAACCCTCCAT 3893912
Score = 109 bits (120), Expect = 6e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || |||||||| | || || ||| | |
Sbjct 3893203 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTAGAACCGTCG 3893144
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| || |||| || || ||||| ||| || | || |||
Sbjct 3893143 GACACCATCGAGAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATCTCCCCAGATCAG 3893084
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| ||||| || ||||| |||| |||||||| ||| ||||||
Sbjct 3893083 CAGCGTCTCATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTACAAC 3893024
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| | || || ||
Sbjct 3893023 ATCCAGAAGGAGTCGACCCTTCA 3893001
Score = 109 bits (120), Expect = 6e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || ||||||| | | || || ||| | |
Sbjct 3893887 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCAACCTTGAGGTAGAACCGTCG 3893828
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| || |||| || || ||||| |||||| | || |||
Sbjct 3893827 GACACCATCGAGAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 3893768
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| ||||| || |||| |||||||| ||| ||||||
Sbjct 3893767 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGACGCACCCTGTCCGATTACAAC 3893708
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| | || || ||
Sbjct 3893707 ATCCAGAAGGAGTCGACCCTTCA 3893685
Score = 96.9 bits (106), Expect = 4e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || || || || || | || || || ||||||||| |||| || || |
Sbjct 3895486 AAAATGCAGATCTTTGTGAAGACCTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCG 3895427
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | | |||| || |||| || || ||||| || ||| | ||
Sbjct 3895426 TCTGACACCATTGAGAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCCCCAGAT 3895367
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| || || ||||| || || | |||||||| || |||
Sbjct 3895366 CAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTTGAGGATGGACGCACCCTGTCGGATTAC 3895307
Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||||| | || || ||
Sbjct 3895306 AACATCCAGAAGGAGTCGACCCTTCA 3895281
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || || |||||| |||| || || | |
Sbjct 3894799 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACTATCACCCTCGAGGTAGAGCCTTCT 3894740
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | |||| || |||| || || ||||| || ||| | || |||
Sbjct 3894739 GATACCATTGAGAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCCCCAGATCAG 3894680
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| || || ||||| || || | |||||||| || ||||||
Sbjct 3894679 CAGCGTCTGATCTTCGCCGGAAAGCAGCTTGAGGATGGACGCACCCTGTCGGATTACAAC 3894620
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| | || || ||
Sbjct 3894619 ATCCAGAAGGAGTCGACCCTTCA 3894597
>seq1555
Length=7220098
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || ||||||||||| |||||||| | || |||||| |
Sbjct 5837715 AAGATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCG 5837774
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| || | | ||| |||| | || |||| |||||||| || || || | ||
Sbjct 5837775 TCGGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGAT 5837834
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| ||||| |||||||| || | ||||||||| |||||
Sbjct 5837835 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTAT 5837894
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||| ||||||||| |||| ||||| | ||| | ||| || | || ||
Sbjct 5837895 AACATTCAGAAGGAGTCCACTCTGCACTTGGTGCTCCGCCTGCGTGGTGG 5837944
>seq1554
Length=6179234
Score = 125 bits (138), Expect = 7e-24
Identities = 163/220 (74%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| |||||||| ||||| || || || || ||||| |||||||| | || || || |||
Sbjct 592316 AATATGCAAATTTTCGTTAAGACTCTGACCGGCAAGACCATCACTTTGGAGGTTGA-GCC 592374
Query 40747 A-CCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
| |||| | | | | |||| |||||| || || | ||||| ||||| |||||| | |
Sbjct 592375 ATCCGATACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAG 592433
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
| ||||| || | |||| ||| || || ||| |||| |||| ||||| || |||||
Sbjct 592434 ATCAGCAGCGTTTGATCTTCGCCGGAAAGCAGTTGGAGGACGGACGCACTCTGTCCGACT 592493
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||||||||| | || || ||| | || ||||
Sbjct 592494 ACAACATCCAGAAGGAGTCGACCCTTCATTTGGTCCTGCG 592533
Score = 125 bits (138), Expect = 7e-24
Identities = 154/205 (75%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748
||||| || ||||| || || || || ||||| ||||||||| | || || || |||| |
Sbjct 592775 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAAGTTGA-GCCATC 592833
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
||| | | | | |||| |||||| || || | ||||| ||||| |||||| | || |
Sbjct 592834 CGATACCATTGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATC 592892
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || | |||| ||| || || |||||||| |||| ||||| || ||||||||
Sbjct 592893 AGCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACA 592952
Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||||| | || || ||
Sbjct 592953 ACATCCAGAAGGAGTCGACCCTTCA 592977
Score = 122 bits (134), Expect = 9e-23
Identities = 153/205 (75%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748
||||| || ||||| || || || || ||||| ||||||||| | || || || |||| |
Sbjct 592547 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAAGTTGA-GCCATC 592605
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
||| | | | | |||| |||||| || || | ||||| || || |||||| | || |
Sbjct 592606 CGATACCATTGAGAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGATC 592664
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || | |||| ||| || || |||||||| |||| ||||| || ||||||||
Sbjct 592665 AGCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACA 592724
Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||||| | || || ||
Sbjct 592725 ACATCCAGAAGGAGTCGACCCTTCA 592749
Score = 122 bits (134), Expect = 9e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748
||||| || ||||| || || || || ||||| ||||||||| | || || || |||| |
Sbjct 593003 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAAGTTGA-GCCATC 593061
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
||| | | | | | |||||| || || | ||||| ||||| |||||| | || ||
Sbjct 593062 CGATACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 593121
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| ||| || || |||||||| |||| ||||| || |||||||||
Sbjct 593122 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAA 593181
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || || ||
Sbjct 593182 CATCCAGAAGGAGTCGACCCTTCA 593205
>seq1558
Length=21120651
Score = 111 bits (122), Expect = 2e-19
Identities = 236/349 (68%), Gaps = 5/349 (1%)
Strand=Plus/Minus
Query 139360 CGGCCTGCCGCGCGGCCTGCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGG 139419
||||||| | || ||||| || ||||||||||||||||| || ||| | ||||||
Sbjct 3328264 CGGCCTGGCAAAGGGTCTGCATGGATTCCACGTGCACGAGTTTGGAGACAACACCAACGG 3328205
Query 139420 GTGCACGTCGGCCGGCGAGCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGC 139479
|||| ||| |||| |||||||| || || ||| |||||||| |||| ||
Sbjct 3328204 CTGCATGTCATCCGGACCCCACTTCAATCCGTATGGCAAGGAGCACGGCGCTCCCGTCGA 3328145
Query 139480 CGAGATCAGGCACGTCGGCGACCTGGGCAACCTCGAGTCGGCGGGCCGCGACGCGCTCAC 139539
||||| | | ||| | ||||| ||||||||| | ||| | | ||| ||| | |||
Sbjct 3328144 CGAGAACCGTCACCTGGGCGATCTGGGCAACATTGAGGCCACCGGC---GACTGCCCCAC 3328088
Query 139540 CGAGGTGAGCCTGACGGACGGCGTCG-TGTCCCTGTACGGTCCGCACAGCATCATCGGAC 139598
| |||| | | | || ||| || | | | || | || | |||||||||||||||
Sbjct 3328087 CAAGGTCAACATCACCGACT-CGAAGATCACGCTCTTTGGCGCCGACAGCATCATCGGAC 3328029
Query 139599 GGAGTCTGGTCGTGCACACGGACAGGGACGATCTGGGCCTCACCGACCATCCATTGAGCA 139658
| | ||||||||||| | || || ||||| |||| | || ||||||
Sbjct 3328028 GCACCGTGGTCGTGCACGCCGATGCCGATGATCTTGGCCAGGGTGGACACGAGCTGAGCA 3327969
Query 139659 AGACCACCGGCAACTCGGGCGGCCGGCTCGCGTGCGGCATCATCGGGAT 139707
|| | || |||||| | || | ||| ||| |||||| | || || ||
Sbjct 3327968 AGTCAACGGGCAACGCTGGTGCCCGCATCGGCTGCGGCGTTATTGGCAT 3327920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515124328824560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |