Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq1558 95.1 1e-14
seq1555 95.1 1e-14
seq1553 91.5 2e-13
>seq1558
Length=21120651
Score = 95.1 bits (104), Expect = 1e-14
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 20716429 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 20716370
Query 60124 TATACTACCGAGGA--TTGAA 60142
||||||| |||||| |||||
Sbjct 20716369 TATACTATCGAGGACGTTGAA 20716349
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 5417758 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 5417699
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 5417698 ATACTATCGAGGAT 5417685
>seq1555
Length=7220098
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 4164186 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 4164245
Query 60124 TATACTACCGAGGAT 60138
||||||| |||||||
Sbjct 4164246 TATACTATCGAGGAT 4164260
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 4165858 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 4165917
Query 60124 TATACTACCGAGGAT 60138
||||||| |||||||
Sbjct 4165918 TATACTATCGAGGAT 4165932
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 3968842 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 3968901
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 3968902 ATACTATCGAGGAT 3968915
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 4028670 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 4028611
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 4028610 ATACTATCGAGGAT 4028597
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 4099643 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 4099584
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 4099583 ATACTATCGAGGAT 4099570
Score = 93.3 bits (102), Expect = 5e-14
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 4158643 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 4158584
Query 60125 ATACTACCGAGGA-TTGA 60141
|||||| |||||| ||||
Sbjct 4158583 ATACTATCGAGGACTTGA 4158566
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 4162880 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 4162821
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 4162820 TATACTATCGAGGA 4162807
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 4165572 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 4165513
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 4165512 TATACTATCGAGGA 4165499
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | | |||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 4028388 TCTCCCCGACGGAGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 4028447
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 4028448 ATACTATCGAGGAT 4028461
Score = 89.7 bits (98), Expect = 6e-13
Identities = 66/76 (87%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGG-AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
|||||| || | ||| ||| |||||| ||||||||||||||||||||| ||||| ||||
Sbjct 4163920 TTCTCCCCGACGGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 4163861
Query 60123 CTATACTACCGAGGAT 60138
|||||||| |||||||
Sbjct 4163860 CTATACTATCGAGGAT 4163845
>seq1553
Length=5866729
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 3321339 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 3321280
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 3321279 ATACTATCGAGGA 3321267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571712306936680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |