Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1555 670 0.0
seq1557 288 9e-73
seq1554 122 8e-23
seq1556 102 7e-17
seq1553 89.7 5e-13
>seq1555
Length=7220098
Score = 670 bits (742), Expect = 0.0
Identities = 1286/1888 (68%), Gaps = 29/1888 (2%)
Strand=Plus/Plus
Query 22104 TCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163
|||||| ||| || ||||| ||||| || || || || |||||||| ||||| ||||| |
Sbjct 5750469 TCTTGTTCACGGTGAACTGAATGGCATTCGCAGCTGGCTTGGTGCGCAGATAGTACATTC 5750528
Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223
| || || ||||| ||||| | |||||| ||||| || |||| |||||||| | |
Sbjct 5750529 CGGTTTTAAGACCTGCTTTCCAGGAGTAAAAGTGTATGGAAGTCAGCTTTCCATAGTTTG 5750588
Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283
|| | ||| | | |||||||||||||||||||| || ||||| || ||||||||||
Sbjct 5750589 GCTCGGCCACATGTATGTTGAACGACTGACTCTGATCTATGAACGCACCACGATCGGCGG 5750648
Query 22284 CCATATTTATCAATGTACGCATC-GACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342
|||| || ||| || || | || |||||||| || ||||| ||||| | | | |
Sbjct 5750649 CCATTTTAATCG-TGGACTTGACTGAGATTTCCCACACCGTCTTATACAGATCTCGCACC 5750707
Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402
| || || | || || | || | || || | || ||||||| || ||
Sbjct 5750708 TTCTGGGGGATGGTCTCAATGTTTTGAATCGATCCCCTGCTGGATATGATCTGGTTCTTC 5750767
Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACT 22462
|| |||| |||||| | | |||| | || | || |||| |||| |||||
Sbjct 5750768 ATGTCGTCGTCCCACAAGTCCAGCTCGGTTAGGTCGCGCAACAAATGATGGTTGACCACC 5750827
Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522
|| || |||||||||| || || || ||| ||||| | ||| | || ||||| |||
Sbjct 5750828 TGGAATTCGCCGGACAGAACTCGCCGGGTGTATATGTTCGTGGTGTAGGGCTCGAAGGAT 5750887
Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582
|||||||| |||| ||||||||| || || || || ||||| || || | || || |||
Sbjct 5750888 TCATTGTTGCCCATTATCTGAGCCGTAGATGCAGTGGGCATGGGAGCAACGAGCAGGGAG 5750947
Query 22583 TTTCTCAAGCCGTGCTTTGAAATTTTACTC-TTGAGCATCGACCAGTCCCACAGATCGGA 22641
|| | | |||||||| ||| |||| || | || |||||||||||| | |
Sbjct 5750948 TTCCGGACACCGTGCTTCTTAATGG-ACTCCTTCAATTTCTGCCAGTCCCACAGGTTCGT 5751006
Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701
||| || ||||||||||| ||||| ||||| | || ||| |||||||||| ||
Sbjct 5751007 TGGC---ACCTTGTCCCACATGTCGTACTGCAAAATTCCTTTGCTCACCGGGCTGCCCTC 5751063
Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761
||| |||||||| | ||| | || ||| ||||||||||| || ||||| ||||| ||
Sbjct 5751064 GTAGGTTTCGTATGCACCTTCGGTCTGGGCCAGTTCGCAGCTGGCTTCCAAGGCGCCATA 5751123
Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCAT 22821
|| || || ||||| || | || ||||| |||| | ||||||||||||| |
Sbjct 5751124 GTAAATGGTTTCGAATATCTGCTGATTCAAAAGACCGGCTTCTTCGCTTTCGTACGGGAA 5751183
Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881
|||||| | | || || || || | ||||||| || || || | || |||| |
Sbjct 5751184 ACGCATGAGAATCAAGGCATCAGCGAATCCCTGAATACCAATGCCCACGGGACGGTGCCT 5751243
Query 22882 CAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941
|| ||| ||| ||||||| |||| ||||| | || ||| ||| | |||| |
Sbjct 5751244 CAAATTGGACTTCCTTGCCTCCGGCAGGGGATAATAGTTGATATCAATTATCTTGTTTAG 5751303
Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAA----CGCCCG 22997
||| |||| || || || || | | ||| || || | || |
Sbjct 5751304 ATTTTTGGTAACTATCTTGGTGACTTCCTTGAGCTTCTTAAAATCATACGTCTTCTCCGG 5751363
Query 22998 ATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTT 23057
|| || ||| |||||| |||||| ||||| | ||||| || || | ||| ||
Sbjct 5751364 CGTG----ACGAACATGTTGAGGGCGATGGAGGCCAAGTTGCAGACTGCAATCTCATCCG 5751419
Query 23058 TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGC 23117
|| | || || || ||||| || || | ||||| ||||| || ||||||| |||
Sbjct 5751420 GTGAGGAATATTCAACGATTTCCGTGCACAAGTTGCTGCACTTGATGGTGCCCACATTCT 5751479
Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177
||||||||| || | ||||| | |||||| ||||||||||||| | || ||||| |
Sbjct 5751480 GCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGAAGAGCATGTACGGATTTCCGGTCTCCA 5751539
Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGC 23237
| |||| ||| ||||| || ||||| | ||||| | ||| ||| | || |
Sbjct 5751540 CTTGCGCCTCAATGATGGCAAACCACAGGGATTGAGCCTTAACCGTTCGGTTGGCCCGAC 5751599
Query 23238 CTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGC 23297
| |||| |||||| || | ||||| | || ||||| | || | ||| || |
Sbjct 5751600 CCTCTTGCTCGTATTTCTCGTACAGCTTTTCGAATTCATCGCCCCACACTTCGTGGAGAC 5751659
Query 23298 CGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAA 23357
| || | | || |||||||| ||| || ||||||||| |||| |
Sbjct 5751660 CAGGACACTTGTGGGGGCACATGAGCGACCAATCACCGTTGGCCTCAACGCGTTTCATGA 5751719
Query 23358 AAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGG 23417
| ||||| |||||||| || ||||| ||||| ||||| ||||| ||| |||||||| |
Sbjct 5751720 AGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGTGCGCGATTCTCTTCTTTGCCCG 5751779
Query 23418 TGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGG 23477
||||||| |||| |||| || || || || |||| ||||| || || | |||| ||
Sbjct 5751780 TGTTCTTCTTCAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGTTCCAAATAAATGG 5751839
Query 23478 CAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACA 23537
|||| || || || | ||| ||| |||||||| || ||||| ||| || ||| | |
Sbjct 5751840 CAAAGGCACCGGGACGCTTGCCGCCTCCCTGATCCACATAACGTGCCACATTATTGAAGA 5751899
Query 23538 CTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAA---C 23594
| || ||||| || || | || ||||| | || | ||| || | |||| |
Sbjct 5751900 CCCTCAGCATGGGAACCAACCCATTGGAAGTACCATTTGTGCCG--CAAA-TCGAGGTGC 5751956
Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654
| ||||| |||| | || |||| || || ||||| ||| | || || || ||||| |
Sbjct 5751957 CCTTTGCACGAATGCAATGCACGTTGAGTCCGATGCCACCGGCGGACTTGGAGATCATGG 5752016
Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714
||||||||| || || | | | |||||||||||| ||| || | | | | | ||
Sbjct 5752017 CGCATTGTTCCACAGACTTGAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAGAAGGA 5752076
Query 23715 AACACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCG 23770
||||||| |||| || || |||| | | |||||| |||||||| || ||
Sbjct 5752077 AACACGACGACAACTGCGGCCGGTTTGTG-GCAGCGGC---AAACAGTGTGGGCGATGCA 5752132
Query 23771 TGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCT 23830
||||| ||||| | | ||||| ||||| || || || | ||| ||||| || ||||||
Sbjct 5752133 TGCGTGAAGTAGCGCTCCGACAGAAGATTATAGGTTTCCACGGCCGCATCGATATCCTCT 5752192
Query 23831 CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCG 23890
|| || || ||||| || |||||||||| ||| | || |||| ||| | | |||
Sbjct 5752193 CCATGGATTCCGATCGCAACGCGCATCAGCATATGCTGCGGTCGCTCTGCGATCTTTCCG 5752252
Query 23891 TTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAG 23950
|| | |||| ||||| ||||| | || ||| || || |||||||||| |||| ||||
Sbjct 5752253 TTTCTCTTGAGAAGATAGGAACGCTCCAGCGTCTTGAAGCCAAAATAGTTATAGCCAAAG 5752312
Query 23951 TCACGATCGTGCACTATGGCCGAATTCA 23978
|||||||| | | ||||| ||| ||||
Sbjct 5752313 TCACGATCATAGATTATGGACGAGTTCA 5752340
Score = 118 bits (130), Expect = 9e-22
Identities = 180/256 (70%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 31176 GGCGAATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCG 31235
|| || | |||| || ||||| || ||||| ||||| || || ||||| || |||||
Sbjct 5837701 GGTGACTGGAATACAAGATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTC 5837760
Query 31236 TCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAG 31295
| || || |||||||| || | | |||||| |||||| | || |||||| ||||
Sbjct 5837761 TTGAGGTCGAACCGTCGGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAG 5837820
Query 31296 GCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGA 31355
| | || || || ||||||||||| || ||||||||||| ||| ||||||| |
Sbjct 5837821 GAATTCCTCCAGATCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCA 5837880
Query 31356 CTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGG 31415
| | || ||||||||||| || || || ||||| || |||| || | ||| | |
Sbjct 5837881 CCCTCTCTGACTATAACATTCAGAAGGAGTCCACTCTGCACTTGGTGCTCCGCCTGCGTG 5837940
Query 31416 GCGGT----AGAAGCG 31427
| ||| |||||||
Sbjct 5837941 GTGGTGCCAAGAAGCG 5837956
>seq1557
Length=14215200
Score = 288 bits (318), Expect = 9e-73
Identities = 565/825 (68%), Gaps = 28/825 (3%)
Strand=Plus/Minus
Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648
|||| || || || || ||||||||||| || || || |||| ||||| || | || |
Sbjct 5422487 AGGCTGAGGCTTCTTTCTGGACCGTCGAGGAGGTGGATTTGTCCAAGGACCTTACTGACT 5422428
Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708
|| | ||| || || ||| | |||| || |||||| |||| || |||||||
Sbjct 5422427 GGCACCGCCTGAAGGACGACGAGCGCCATTTCATCTCGCACGTGCTGGCCTTCTTCGCCG 5422368
Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768
| || ||||| || || |||||||| |||| || | || || || ||||| | |
Sbjct 5422367 CCTCTGATGGCATCGTAAACGAGAACCTGGTGGAGCGCTTCAGTCAGGAGGTGCAGATCA 5422308
Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828
||||||| ||||||| ||||| || || | ||||| || |||||||| || || ||||
Sbjct 5422307 CGGAGGCACGATGCTTCTACGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 5422248
Query 57829 ATTCGCTACTCATCGATACGTACGTGAAGGA----CAACGACGAGAAACGTAGACTGTTC 57884
| | | ||||| || ||| | ||| || | ||||| ||| ||||||
Sbjct 5422247 ACAGTGTTTTGATCGACACTTACATCCGGGATCCACACCAGCGAGA---GTAC-CTGTTC 5422192
Query 57885 AACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGG 57941
||||| |||||||| ||||| || | ||| |||||||| ||| | | |||
Sbjct 5422191 AACGCTATCGAAACGATGCCGGCTGTG---AAGCGCAAGGCAGACTGGGCCCTGTCCTGG 5422135
Query 57942 ATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGT 58001
|| | | |||||| |||| ||| | | ||||| || |||||||| || ||
Sbjct 5422134 ATCTCATCCAAGTCGGCCAATTTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGAGGGC 5422075
Query 58002 ATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCC 58061
|| ||||| |||||||| || | || || ||| | ||||| ||||| ||||||||
Sbjct 5422074 ATTTTCTTCAGCGGCAGCTTCGCCTCCATTTTCTGGCTTAAGAAGCGCGGTCTGATGCCT 5422015
Query 58062 GGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTG-C 58120
|| |||| || ||||||| |||| || ||||||||||| | || || |||| |
Sbjct 5422014 GGATTGACCTTCTCCAACGAGCTGATCTCTCGCGACGAGGGCTTGCACTGCGACTTTGCC 5421955
Query 58121 GTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTAT 58180
||| || |||| | ||| | || | ||| | ||| || |||||| | || || ||
Sbjct 5421954 GTG-CTGATGTTCCAGCACCTGGTGCAGCGACCCAAGCGCGAGCGCATCATCGAGATCAT 5421896
Query 58181 CACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCT 58240
| ||| ||||| || || || | ||||| ||||||| ||||| || || || |
Sbjct 5421895 CCGCGACGCGGTGGCCATAGAGCAGGAGTTCCTCACCGATGCCCTGCCCGTCAATTTGAT 5421836
Query 58241 CGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCT 58300
||| ||||| || ||||||| ||||||||||||| || || ||| | ||||||
Sbjct 5421835 CGGCATGAATTGCGACCTGATGTCCCAGTACATTGAGTTCGTAGCGGAC---CGTTTGCT 5421779
Query 58301 C---GAACTG---ATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAA 58354
| || || ||||| || || |||||||| ||||| || ||| | || ||| |
Sbjct 5421778 CGTGGAGTTGGGCGTTGGAAAG-ATC--TACAACACCAAAAACCCATTTAACTTCATGGA 5421722
Query 58355 TCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGT 58399
|||| ||||| || || ||||| ||||||||||| || || ||
Sbjct 5421721 GATGATATCGCTGGACGGAAAGACCAACTTTTTCGAGAAGAAGGT 5421677
>seq1554
Length=6179234
Score = 122 bits (134), Expect = 8e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| ||||||||||| ||||| || ||||| | || ||||| ||
Sbjct 592316 AATATGCAAATTTTCGTTAAGACTCTGACCGGCAAGACCATCACTTTGGAGGTTGAGCCA 592375
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||| | |||| | ||||| | || ||||||||| || | || || ||
Sbjct 592376 TCCGATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGAT 592435
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||||||| | || ||||| || || |||||||| ||| ||| || ||| ||
Sbjct 592436 CAGCAGCGTTTGATCTTCGCCGGAAAGCAGTTGGAGGACGGACGCACTCTGTCCGACTAC 592495
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || ||||| |||||| |||| ||
Sbjct 592496 AACATCCAGAAGGAGTCGACCCTTCATTTGGTCCT 592530
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||||||||| ||||| || |||||| | || ||||| || ||
Sbjct 592546 CATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAAGTTGAGCCATC 592605
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | | || | ||||| | || |||||||||||| | || || || ||
Sbjct 592606 CGATACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCA 592665
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||| | || ||||| || || ||| |||| ||| ||| || ||| || ||
Sbjct 592666 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAA 592725
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || ||||| ||||| |||| ||
Sbjct 592726 CATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 592758
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||||||||| ||||| || |||||| | || ||||| || ||
Sbjct 592774 CATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAAGTTGAGCCATC 592833
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | | || | ||||| | || ||||||||| || | || || || ||
Sbjct 592834 CGATACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 592893
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||| | || ||||| || || ||| |||| ||| ||| || ||| || ||
Sbjct 592894 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAA 592953
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || ||||| ||||| |||| ||
Sbjct 592954 CATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 592986
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||||||||| ||||| || |||||| | || ||||| || ||
Sbjct 593002 CATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAAGTTGAGCCATC 593061
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | | || | ||||| | || ||||||||| || | || || || ||
Sbjct 593062 CGATACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 593121
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||| | || ||||| || || ||| |||| ||| ||| || ||| || ||
Sbjct 593122 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAA 593181
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || ||||| ||||| |||| ||
Sbjct 593182 CATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 593214
>seq1556
Length=7591821
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| || ||
Sbjct 3893431 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGCCATCG 3893372
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | ||| |||||||| || | || || || |||
Sbjct 3893371 GACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGAATTCCCCCAGATCAG 3893312
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||||||||| || ||||||||| || || |||||| |||
Sbjct 3893311 CAGCGTCTGATCTTCGCTGGCAAGCAATTGGAAGACGGACGCACCCTGTCCGATTACAAC 3893252
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || || || || ||| |||| || | ||| | || ||||
Sbjct 3893251 ATCCAGAAGGAGTCAACCCTCCATTTGGTTCTCCGTCTGCGTGGTGGTA 3893203
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| || ||
Sbjct 3894115 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGCCATCG 3894056
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | ||| |||||||| || | || || || |||
Sbjct 3894055 GACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGAATTCCCCCAGATCAG 3893996
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||||||||| || ||||||||| || || |||||| |||
Sbjct 3893995 CAGCGTCTGATCTTCGCTGGCAAGCAATTGGAAGACGGACGCACCCTGTCCGATTACAAC 3893936
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || || || || ||| |||| || | ||| | || ||||
Sbjct 3893935 ATCCAGAAGGAGTCAACCCTCCATTTGGTTCTCCGTCTGCGTGGTGGTA 3893887
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||| |||| || || || ||||| | || || ||||||||
Sbjct 3893203 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTAGAACCGTCG 3893144
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||| ||||| || | | || || |||
Sbjct 3893143 GACACCATCGAGAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATCTCCCCAGATCAG 3893084
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| ||||| || |||||||| || || |||||| |||
Sbjct 3893083 CAGCGTCTCATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTACAAC 3893024
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||| ||||| |||| || | ||| | || ||||
Sbjct 3893023 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTA 3892975
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||| |||| || || || |||| | | || || ||||||||
Sbjct 3893887 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCAACCTTGAGGTAGAACCGTCG 3893828
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||| ||||| || | || || || |||
Sbjct 3893827 GACACCATCGAGAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 3893768
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| ||||| ||| | || ||| || || |||||| |||
Sbjct 3893767 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGACGCACCCTGTCCGATTACAAC 3893708
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||| ||||| |||| || | ||| | || ||||
Sbjct 3893707 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTA 3893659
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| || ||
Sbjct 3894571 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGCCATCG 3894512
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || |||||||| ||| | || || || |||
Sbjct 3894511 GACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGCATCCCCCCAGATCAG 3894452
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| |||||||| |||| ||| || | |||||| |||
Sbjct 3894451 CAGCGTCTCATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTTTCCGATTACAAC 3894392
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || ||||| ||||| |||| || | ||| | || ||||
Sbjct 3894391 ATTCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTA 3894343
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| || ||
Sbjct 3895255 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGCCATCG 3895196
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || |||||||| ||| | || || || |||
Sbjct 3895195 GACACCATTGAGAATGTGAAGGCTAAGATCCAAGACAAGGAGGGCATCCCCCCAGATCAG 3895136
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| |||||||| |||| ||| || | |||||| |||
Sbjct 3895135 CAGCGTCTCATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTTTCCGATTACAAC 3895076
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || ||||| ||||| |||| || | ||| | || ||||
Sbjct 3895075 ATTCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTA 3895027
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| || ||
Sbjct 3893659 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGCCATCG 3893600
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||| ||||| || | || || || |||
Sbjct 3893599 GACACCATTGAGAATGTGAAGGCTAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 3893540
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| ||||| || |||||||| || || |||||| |||
Sbjct 3893539 CAGCGTCTCATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTACAAC 3893480
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||| ||||| |||| || | ||| | || ||||
Sbjct 3893479 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGTA 3893431
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| || ||
Sbjct 3895027 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGCCATCG 3894968
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||| ||||| || | || || || |||
Sbjct 3894967 GACACCATTGAGAATGTGAAGGCTAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 3894908
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| |||||||| |||| ||| || | |||||| |||
Sbjct 3894907 CAGCGTCTCATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTTTCCGATTACAAC 3894848
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||| ||||| ||||| || | ||| | || ||||
Sbjct 3894847 ATCCAGAAGGAGTCGACCCTTCACCTGGTTCTCCGTCTGCGTGGAGGTA 3894799
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| || ||
Sbjct 3894343 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGCCATCG 3894284
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||| ||||| || | || || || |||
Sbjct 3894283 GACACCATTGAGAATGTGAAGGCTAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 3894224
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| ||||| || |||| ||| || | |||||| |||
Sbjct 3894223 CAGCGTCTCATCTTCGCCGGCAAGCAACTGGAGGACGGACGCACCCTTTCCGATTACAAC 3894164
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||| ||||| |||| || ||||| | || ||||
Sbjct 3894163 ATCCAGAAGGAGTCGACCCTTCACTTGGTTCTCCGACTGCGTGGTGGTA 3894115
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| || ||
Sbjct 3892975 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGCCATCG 3892916
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||| ||||| || | || || || |||
Sbjct 3892915 GACACCATTGAGAATGTGAAGGCTAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 3892856
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| ||||| || |||||||| || | |||||| |||
Sbjct 3892855 CAGCGTCTCATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTTTCCGATTACAAC 3892796
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || ||||| ||||| |||| ||
Sbjct 3892795 ATCCAGAAGGAGTCGACCCTTCACTTGGTGCT 3892764
Score = 84.2 bits (92), Expect = 2e-11
Identities = 163/238 (68%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244
|||| || ||||| || || || ||||| |||| || || || |||||| |||| || |
Sbjct 3895491 AATCCAAAATGCAGATCTTTGTGAAGACCTTGACCGGAAAGACCATCACCCTCGAGGTAG 3895432
Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304
| ||||| |||| | || | || || | || ||| ||||| || | || |
Sbjct 3895431 AGCCGTCTGACACCATTGAGAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCCC 3895372
Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGC 31363
| || ||||||||||| || ||||| || || ||| | || || | | | || ||
Sbjct 3895371 CAGATCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTTGAGGA-TGGACGCACCCTGTCG 3895313
Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| ||||| || || || ||||| ||||| |||| || | ||| | || ||||
Sbjct 3895312 GATTACAACATCCAGAAGGAGTCGACCCTTCACTTGGTTCTGCGTCTGCGAGGAGGTA 3895255
>seq1553
Length=5866729
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || || || ||||| || |||||| | || || || || ||
Sbjct 2325259 ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCT 2325318
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||| ||||| ||| | || || || |||
Sbjct 2325319 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCAG 2325378
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| ||||| ||| |||| || ||| | ||| || |||
Sbjct 2325379 CAGCGTCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCCGACTACAAC 2325438
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||| || || |||| || | ||| | || ||||
Sbjct 2325439 ATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGCCTGCGTGGTGGTA 2325487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445684317689520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |