Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18] 14,731 sequences; 166,592,095 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1553 185 6e-42 >seq1553 Length=5866729 Score = 185 bits (204), Expect = 6e-42 Identities = 400/592 (68%), Gaps = 15/592 (3%) Strand=Plus/Plus Query 25381 TCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGAT 25440 |||| |||||||||||| || | || || || ||||||||| |||||||| | Sbjct 1124581 TCAGCTTGGGAAAGGGTCGCGGTGTGCGCTGCAGTTGCTCCTTCAGCGGCTCTACGTGGT 1124640 Query 25441 CCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAA 25500 |||||||||||| | || |||| ||||| ||||| || ||||| | || || || | Sbjct 1124641 TCAGGTAGACGTGTGTATCGCCCATGGTGTGAACAAAGTCGCCCGGCTTCAGACCCGTCA 1124700 Query 25501 CGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACC 25560 | | || ||||||| ||||| || |||| |||||||||||||||||| || | | Sbjct 1124701 CATGGGCAATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTTAAAGGGTACGCCCAGGC 1124760 Query 25561 CCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCG------TCGCTCACG 25614 ||||||| | | |||||||| ||||| ||||| ||||| || ||| ||| Sbjct 1124761 CCATGTCGGCGC-TTCTCTGGTACAGCTGGCACGACAGCTCACCGCGCTTCTCGGAGACG 1124819 Query 25615 TAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTC 25674 |||||||| || | || |||||| || || || || | ||| || ||| Sbjct 1124820 TAAAACTGCGCCAAGCAGTGGCACGGCGGCAGGGCCATCTTTGGGATGTCCAGCGGATTC 1124879 Query 25675 CAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTT 25734 || || ||| |||||||| | |||| || || | |||||| | | || | | Sbjct 1124880 CAAGCCGACATGATGATGCGTCGGTCTGAGGGCTTATTCCTGAT--GGT-GTCGATCACT 1124936 Query 25735 T---GCAGCTGATCCACCCCCATCCCCGAGTAG-TCTGCCCTCATGTCCGTGTACTCTGC 25790 | ||||||| || | ||| | || |||| | | | || || | ||||| || Sbjct 1124937 TGGCGCAGCTGGTCGATGCCCTTGCCGCTGTAGTTATCGTCGCAGGTGC-CGTACTGCGC 1124995 Query 25791 TCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTC 25850 ||||||| |||||||||||| ||||||||||| || || || ||| | | | | | Sbjct 1124996 CCCGAAATGCCTCCACTGGAAGCCGTACACCGGGCCCAGATCGCCAACGACTCGGCCCGT 1125055 Query 25851 AAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTT 25910 || ||| |||| |||| || |||||||| | || | |||||||| | || ||| Sbjct 1125056 GAACCCCATCTTGTCCAGGAATTCTCTGGAGCTGTTCCCATCCCAGATGTGCACATTCTT 1125115 Query 25911 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 | | ||| ||||| || || ||| |||||||||||||||||| Sbjct 1125116 CGCCTGCAGCAGTTTGGCGTCCGTCTTGCCTGCCACGAACCACAGCAGCTCC 1125167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340076533714863