Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1553 87.8 1e-12
>seq1553
Length=5866729
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| || |||||||| || ||||||||||||| | || | | |||
Sbjct 2325470 AGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 2325411
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|||| || |||||||| | || || ||||| || || || | |||||| || ||
Sbjct 2325410 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCC 2325351
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || || ||| || | | | ||||| |||||| |||| ||||||||
Sbjct 2325350 TGGATCTTAGC--CTTGACATTCTCGATGGTGTCAGAAGGCTCCACCTCCAAGGTGATGG 2325293
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || ||||| || ||||| || || ||||||||
Sbjct 2325292 TCTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 2325259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405015272905690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |