Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18] 14,731 sequences; 166,592,095 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq1534 95.1 3e-16 >seq1534 Length=912625 Score = 95.1 bits (104), Expect = 3e-16 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 |||||| ||| |||||||| | |||| ||| || || |||||||||||||| || Sbjct 121039 CCCATGGCGCGGGTCTTTCCGAAGGTCACCAAATGCACGTTCCACAAATACGGTCCATCC 121098 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 ||| || | | | |||| || || ||| | || || |||| | |||||||| ||| Sbjct 121099 GGCAGTGTGCAGACCCACGACGGTCTGTGCGTGCTTCCCCTGAACATTGTCAACGAAAAG 121158 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||| | ||||| |||||||||||| Sbjct 121159 ATCTACGTGTTCCTGTGGTTCTGGTTC 121185 Score = 77.0 bits (84), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 || || || ||||| || || || || || || ||| | || |||| ||||||||| Sbjct 96480 TGCACCTTCCACAAGTATGGCCCCTCCGGTTCGCTGCAGAAGCACGACTCCCTCTGCATC 96421 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCT 3481 || ||| ||| | || |||||||||| ||| ||||| ||||||||||||||| Sbjct 96420 CTGCCGCTAAACATCGTGAACGAGAAGACGTACGTTTTCATCTGGTTCTGGTTCT 96366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12477989218500