Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1556 95.1 1e-14
seq1555 91.5 1e-13
>seq1556
Length=7591821
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| || || | || || || || |||||||||||||||
Sbjct 3894342 ATACCACCACGCAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCG 3894401
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || || || |||||||| || ||| ||||||||||||| || || ||
Sbjct 3894402 GAAAGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATGAGACGCTGCTGATCTGGG 3894461
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| || | | |||| |||||| | | ||
Sbjct 3894462 GGGATGCCCTCCTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTGTCCGATGGCTCA 3894521
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| || || || || || || ||||||||
Sbjct 3894522 ACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3894571
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| || || | || || || || |||||||||||||||
Sbjct 3895026 ATACCACCACGCAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCG 3895085
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || || || |||||||| || ||| ||||||||||||| || || ||
Sbjct 3895086 GAAAGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATGAGACGCTGCTGATCTGGG 3895145
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| || | | |||| |||||| | | ||
Sbjct 3895146 GGGATGCCCTCCTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTGTCCGATGGCTCA 3895205
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| || || || || || || ||||||||
Sbjct 3895206 ACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3895255
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| ||||| | || || || || || ||||||||||||
Sbjct 3893202 ATACCACCACGCAGACGGAGAACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCG 3893261
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||||| | ||| || |||||| |||| |||||||| || || ||
Sbjct 3893262 GACAGGGTGCGTCCGTCTTCCAATTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGG 3893321
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || ||||| || || || | | |||| |||||| | | ||
Sbjct 3893322 GGAATTCCCTCCTTGTCTTGGATTTTAGCCTTCACATTCTCAATGGTGTCCGATGGCTCA 3893381
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| || || || || || || ||||||||
Sbjct 3893382 ACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3893431
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| || || | || || || || || ||||||||||||
Sbjct 3893430 ATACCACCACGCAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCG 3893489
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||||| ||||| || || ||| ||||||||||||| || || ||
Sbjct 3893490 GACAGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGG 3893549
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || || || |||||| || | | |||| |||||| | | ||
Sbjct 3893550 GGGATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTCTCAATGGTGTCCGATGGCTCA 3893609
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| || || || || || || ||||||||
Sbjct 3893610 ACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3893659
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| ||||| | || || || || || ||||||||||||
Sbjct 3893886 ATACCACCACGCAGACGGAGAACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAATCG 3893945
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||||| | ||| || |||||| |||| |||||||| || || ||
Sbjct 3893946 GACAGGGTGCGTCCGTCTTCCAATTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGG 3894005
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || ||||| || || || | | |||| |||||| | | ||
Sbjct 3894006 GGAATTCCCTCCTTGTCTTGGATTTTAGCCTTCACATTCTCAATGGTGTCCGATGGCTCA 3894065
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| || || || || || || ||||||||
Sbjct 3894066 ACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3894115
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | || ||| || || | || || || || || |||||||||||
Sbjct 3895254 ATACCTCCTCGCAGACGCAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 3895313
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| ||||| || || || ||| |||| |||||||| || || ||
Sbjct 3895314 GACAGGGTGCGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGG 3895373
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || || || |||||| || | | |||| |||||| | | ||
Sbjct 3895374 GGAATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTCTCAATGGTGTCAGACGGCTCT 3895433
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || ||||||| || || ||||| ||||||||
Sbjct 3895434 ACCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTCACAAAGATCTGCAT 3895483
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| || || | || || || || || ||||||||||||
Sbjct 3892974 ATACCACCACGCAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCG 3893033
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||||| ||||| || || ||| ||||||||||||| || || ||
Sbjct 3893034 GACAGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGG 3893093
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
| || || || || || |||||| || | | || | |||||| | | |||
Sbjct 3893094 GAGATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTCTCGATGGTGTCCGACGGTTCT 3893153
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || || ||||||| ||| || || || ||||||||
Sbjct 3893154 ACCTCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3893203
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| |||| | ||| || || | || || || || || ||||||||||||
Sbjct 3894114 ATACCACCACGCAGTCGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCG 3894173
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || || || ||||| || || ||| ||||||||||||| || || ||
Sbjct 3894174 GAAAGGGTGCGTCCGTCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGG 3894233
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || || || |||||| || | | |||| |||||| | | ||
Sbjct 3894234 GGGATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTCTCAATGGTGTCCGATGGCTCA 3894293
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| || || || || || || ||||||||
Sbjct 3894294 ACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3894343
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | || ||| || || | || || || || || |||||||||||
Sbjct 3894570 ATACCTCCTCGCAGACGCAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 3894629
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| ||||| || || || ||| |||| |||||||| || || ||
Sbjct 3894630 GACAGGGTGCGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGG 3894689
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || || || |||||| || | | |||| ||| || | | ||
Sbjct 3894690 GGAATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTCTCAATGGTATCAGAAGGCTCT 3894749
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || ||||||| ||| || || || ||||||||
Sbjct 3894750 ACCTCGAGGGTGATAGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3894799
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| || || | || || || || || ||||||||||||
Sbjct 3893658 ATACCACCACGCAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCG 3893717
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || || ||||| || || || ||| |||| |||||||| || || ||
Sbjct 3893718 GACAGGGTGCGTCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 3893777
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || || || |||||| || | | || | |||||| | | |||
Sbjct 3893778 GGGATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTCTCGATGGTGTCCGACGGTTCT 3893837
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | | | | || || ||||||| ||| || || || ||||||||
Sbjct 3893838 ACCTCAAGGTTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3893887
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| | || | || || || || || ||||||||||||
Sbjct 3894798 ATACCTCCACGCAGACGGAGAACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCG 3894857
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || || || |||||||| || ||| ||||||||||||| || || ||
Sbjct 3894858 GAAAGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATGAGACGCTGCTGATCTGGG 3894917
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || || || |||||| || | | |||| |||||| | | ||
Sbjct 3894918 GGGATTCCCTCCTTATCCTGAATCTTAGCCTTCACATTCTCAATGGTGTCCGATGGCTCA 3894977
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| || || || || || || ||||||||
Sbjct 3894978 ACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3895027
>seq1555
Length=7220098
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | | || || || | || || || || |||||||| || ||
Sbjct 5837945 ACCACCACGCAGGCGGAGCACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCAGA 5837886
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || || |||||| || || || |||||| |||| |||||||| || || |||||
Sbjct 5837885 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 5837826
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||||||||| |||||| ||| | | ||| | || || | | ||||||
Sbjct 5837825 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGACGGTTCGAC 5837766
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || ||||| || || || || || || ||||||||
Sbjct 5837765 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 5837718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420058971564372
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