Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq1555 107 8e-18
seq1554 93.3 2e-13
>seq1555
Length=7220098
Score = 107 bits (118), Expect = 8e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || |||||||| || || || || || || || |||||||| || ||| | ||
Sbjct 5837718 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCGTCG 5837777
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| | | ||| || ||||| || || |||||||||||||| |||||
Sbjct 5837778 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 5837837
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || ||| | || || || || |||||||| | || | | || |||||
Sbjct 5837838 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 5837897
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | ||||| | || || ||||| ||
Sbjct 5837898 ATTCAGAAGGAGTCCACTCTGCACTTGGT 5837926
>seq1554
Length=6179234
Score = 93.3 bits (102), Expect = 2e-13
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || |||||||| || || || || | || ||||| ||||
Sbjct 592547 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCC 592606
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | || || || || || ||||||||||| || || |||||
Sbjct 592607 GATACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCAG 592666
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||||| || ||| | || || || || || || ||| | ||| || | || || ||
Sbjct 592667 CAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAAC 592726
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
|| | ||||| | || |||||||| ||
Sbjct 592727 ATCCAGAAGGAGTCGACCCTTCACTTGGT 592755
Score = 84.2 bits (92), Expect = 9e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||||||||| || ||||| || || || || ||| | || ||||| ||||
Sbjct 592319 ATGCAAATTTTCGTTAAGACTCTGACCGGCAAGACCATCACTTTGGAGGTTGAGCCATCC 592378
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || | || || || || || ||||| ||||| || || |||||
Sbjct 592379 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAG 592438
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||||| || ||| | || || || | || || ||| | ||| || | || || ||
Sbjct 592439 CAGCGTTTGATCTTCGCCGGAAAGCAGTTGGAGGACGGACGCACTCTGTCCGACTACAAC 592498
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
|| | ||||| | || ||||| || ||
Sbjct 592499 ATCCAGAAGGAGTCGACCCTTCATTTGGT 592527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975345501056948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |