Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1551 95.1 2e-14
seq1557 93.3 5e-14
>seq1551
Length=3727775
Score = 95.1 bits (104), Expect = 2e-14
Identities = 170/246 (69%), Gaps = 2/246 (1%)
Strand=Plus/Plus
Query 176020 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 176079
||| || || ||| | | || |||||||| ||||| | |||||||| ||||| || ||
Sbjct 3065294 ATCTTTGCCTCCCGTCAAGCGGGTACCAAATTGACCGCGTGGCTCAAGCAGATTAATGTT 3065353
Query 176080 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTG-TCCGCGAGAGAGACTTCAC 176138
||| | ||||| | | | |||| || || || || || || || || || || |
Sbjct 3065354 GTTCGCACCCACAAAATTCTGGGCCAGATTTACGATTGTCATCTGC-AGGGATACCTCTC 3065412
Query 176139 CGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCAT 176198
|||||||||| || | |||| || || || | | | ||| ||||| |||| ||||
Sbjct 3065413 CGTGGTGGTAGGCCGACATCTCCGCCACTGATCCGGATAGCTGGGCCACCTTCACCTCAC 3065472
Query 176199 CCTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCAT 176258
|||| |||| | | |||||| | | |||| ||||| || || ||||| | ||||
Sbjct 3065473 GCTTGTCATTCCTTTTGAAACAAGTGAACATCACCTTCCGCTGACCCGGCTTCAAGCCAT 3065532
Query 176259 CCGCCA 176264
|| |||
Sbjct 3065533 CCACCA 3065538
>seq1557
Length=14215200
Score = 93.3 bits (102), Expect = 5e-14
Identities = 289/442 (65%), Gaps = 4/442 (1%)
Strand=Plus/Minus
Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 102239
||||| || |||| ||||| || ||||| || |||||| || |||| | |
Sbjct 5422107 GAGCGCATCATCGCCTTTGCCGCCGTGGAGGGCATTTTCTTCAGCGGCAGCTTCGCCTCC 5422048
Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299
|||| ||||| |||||||| ||||| ||||| || | ||||||||||||||| |||
Sbjct 5422047 ATTTTCTGGCTTAAGAAGCGCGGTCTGATGCCTGGATTGACCTTCTCCAACGAGCTGATC 5421988
Query 102300 TCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTG-GAACTTTTCAAATTATTGCGTAT 102358
||||| |||||||| | ||| || ||||| ||| | || || | | | |
Sbjct 5421987 TCTCGCGACGAGGGCTTGCACTGCGACTTTGCCGTGCTGATGTTCCAGCACCTGGTGCAG 5421928
Query 102359 TAAACCAACGACTGAGACTATTCAT-TCTATTGTTAAGGAAGCCGTTGAGATTGAGAAGG 102417
| |||| | ||| | |||| || | || || || | || ||| |||
Sbjct 5421927 CGACCCAA-GCGCGAG-CGCATCATCGAGATCATCCGCGACGCGGTGGCCATAGAGCAGG 5421870
Query 102418 GATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCG 102477
||| | |||||||| || | | | ||||| ||||||| || |||||||
Sbjct 5421869 AGTTCCTCACCGATGCCCTGCCCGTCAATTTGATCGGCATGAATTGCGACCTGATGTCCC 5421810
Query 102478 AATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCAATTTGGA 102537
| || ||||||| ||| | || | ||| | | || | || || || | |
Sbjct 5421809 AGTACATTGAGTTCGTAGCGGACCGTTTGCTCGTGGAGTTGGGCGTTGGAAAGATCTACA 5421750
Query 102538 ACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCT 102597
|| |||| || |||||| |||||||||||| || || ||||| ||||| ||||| |
Sbjct 5421749 ACACCAAAAACCCATTTAACTTCATGGAGATGATATCGCTGGACGGAAAGACCAACTTTT 5421690
Query 102598 TCGAAAAGAGGGTTGGGGACTA 102619
|||| |||| ||| | ||| ||
Sbjct 5421689 TCGAGAAGAAGGTGGCGGAGTA 5421668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620628098046320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |