Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18] 14,731 sequences; 166,592,095 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1558 86.0 7e-12 >seq1558 Length=21120651 Score = 86.0 bits (94), Expect = 7e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 |||| || ||||| || | |||||||| || | ||||| ||||| || || || Sbjct 15846958 ATGGCGGACAGGTGTACTTGGATGGAGCCAACATGAATGCCCAGGTTGGGCTGTGTCGAC 15846899 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 | | || ||||| ||||| | |||||| ||| | || || || ||||| ||||| | Sbjct 15846898 CTGGAGATTATGGCAGTGATGTTTCTCATCTCAACCTGCACAAGACCTTCTGCATTCCTC 15846839 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||||||| |||||||| | ||||| || || || Sbjct 15846838 ATGGAGGTGGTGGTCCTGGAATGGGTCCCATCGGCGT 15846802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579106145203040