Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18] 14,731 sequences; 166,592,095 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1558 87.8 2e-12 >seq1558 Length=21120651 Score = 87.8 bits (96), Expect = 2e-12 Identities = 166/242 (69%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 159539 TGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGAC 159598 |||| ||| | |||||||| |||||||| ||| || || || || |||| | | Sbjct 15847042 TGTCCTGTCTAATGATTACCTATCCATCGACAATGGGCGTGTTCGAGG-AAACGGTTGCC 15846984 Query 159599 -AGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 | || || | | | || || |||| || ||||| || | ||||| || || | Sbjct 15846983 GATATTTGCACCCTGATCCACAAGCATGGCGGACAGGTGTACTTGGATGGAGCCAACATG 15846924 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 ||||| ||||| || || ||| | || ||||| ||||| | |||||| ||| Sbjct 15846923 AATGCCCAGGTTGGGCTGTGTCGACCTGGAGATTATGGCAGTGATGTTTCTCATCTCAAC 15846864 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777 | || ||||| ||||| ||||| ||||||||||| |||||||| | ||||| || || Sbjct 15846863 CTGCACAAGACCTTCTGCATTCCTCATGGAGGTGGTGGTCCTGGAATGGGTCCCATCGGC 15846804 Query 159778 GT 159779 || Sbjct 15846803 GT 15846802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587942917722160