Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18] 14,731 sequences; 166,592,095 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1558 105 5e-17 >seq1558 Length=21120651 Score = 105 bits (116), Expect = 5e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 550394 ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAA 550453 ||||||||||| || || || ||||| || || || ||||| || || || ||||| ||| Sbjct 13654565 ACGGATGCAGTCATCACAGTTCCAGCCTACTTCAACGACTCCCAGCGCCAGGCTACCAAA 13654624 Query 550454 GATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCT 550513 || ||||| | || || || || ||||| || || || |||||||| || || || || Sbjct 13654625 GACGCTGGTCACATCGCCGGCCTGAATGTGCTCCGCATCATCAATGAGCCCACGGCGGCA 13654684 Query 550514 GCACTTGCATATGGACTTGATAA 550536 ||||| || || ||||| ||||| Sbjct 13654685 GCACTGGCCTACGGACTGGATAA 13654707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028516958283190