Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1555 159 7e-34
seq1554 143 5e-29
seq1557 102 2e-16
>seq1555
Length=7220098
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || | || || || || ||||||||||| || || ||||| || ||||| |||||
Sbjct 5837945 ACCACCACGCAGGCGGAGCACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCAGA 5837886
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | | || ||||| || || || ||||| ||||| || | || |||||||||||
Sbjct 5837885 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 5837826
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|||||||| || || |||||||| ||||| |||||||| || ||||| ||||| ||
Sbjct 5837825 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGACGGTTCGAC 5837766
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | ||| || |||||||| || | ||||| || || ||||||||
Sbjct 5837765 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 5837718
>seq1554
Length=6179234
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || |||||| || ||||| || || || || ||||| || || || || ||
Sbjct 592773 CCACCGCGCAGACGCAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 592714
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | ||||| || || || ||||| || ||||| | | || |||||||| ||
Sbjct 592713 AGAGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGG 592654
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||||||||| || || ||||| || || || || ||||| ||||| || || |||
Sbjct 592653 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTATCGGATGGCTCAACT 592594
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || |||||||| |||| ||||| || || ||||||||
Sbjct 592593 TCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 592547
>seq1557
Length=14215200
Score = 102 bits (112), Expect = 2e-16
Identities = 155/218 (71%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 198331 ATGACCCTCTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTT 198390
||||| || ||||| | ||||| | ||| || | | || ||||||||||| | |
Sbjct 1364482 ATGACGACCTGTGGAACTCGGCGCAACTGCAGCTGGTGCGCGAGGGAAAAATGCACGGCT 1364541
Query 198391 TTTTAAGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTT 198450
|||| | ||||||||||| |||||||| || ||||||||| |||||||| | || |
Sbjct 1364542 TTTTGCGCATGTACTGGGCCAAAAAGATTCTGGAATGGACAGCGACACCGGAGCAGGCGT 1364601
Query 198451 TGAGTTATAGTATCTATCTAAACAATAAGTACGAACTAGACGGCACG-GATCCTAACGGA 198509
|| || ||| || ||| | |||||| || || || ||| || || |||||
Sbjct 1364602 TGGAATACGCAATCCTACTGAACGACAAGTACAGTCTGGATGG-ACGCGACCCCAACGGC 1364660
Query 198510 TACGTAGGTTGTATGTGGTCTATTTGCGGATTACATGA 198547
|| || ||||| |||||||| ||| |||| | |||||
Sbjct 1364661 TATGTCGGTTGCATGTGGTCCATTGGCGGCGTCCATGA 1364698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981641889013809
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |