Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq1557 102 1e-16
>seq1557
Length=14215200
Score = 102 bits (112), Expect = 1e-16
Identities = 186/270 (69%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 183014 ATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTT 183073
||||| || ||||| | | ||| | ||| || || | || ||||||||||| | |
Sbjct 1364482 ATGACGACCTGTGGAACTCGGCGCAACTGCAGCTGGTGCGCGAGGGAAAAATGCACGGCT 1364541
Query 183074 TTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTT 183133
|||| || ||||||||||| |||||||| || ||||||||| || ||||| | || |
Sbjct 1364542 TTTTGCGCATGTACTGGGCCAAAAAGATTCTGGAATGGACAGCGACACCGGAGCAGGCGT 1364601
Query 183134 TGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACG-GATCCTAACGGA 183192
|| || ||| ||||| | |||||| || || || ||| || || |||||
Sbjct 1364602 TGGAATACGCAATCCTACTGAACGACAAGTACAGTCTGGATGG-ACGCGACCCCAACGGC 1364660
Query 183193 TACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCT 183252
|| || ||||| |||||||| ||| |||| | || || | | ||||| || | ||
Sbjct 1364661 TATGTCGGTTGCATGTGGTCCATTGGCGGCGTCCATGACATGGGCTGGAAGGAGCGGGCT 1364720
Query 183253 ATATTTGGAAAGATAAGATATATGAATTAT 183282
| || || ||| | | || ||||| |||
Sbjct 1364721 GTCTTCGGTAAGGTTCGGTACATGAACTAT 1364750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903244848120160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |