Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq1553 291 9e-74
>seq1553
Length=5866729
Score = 291 bits (322), Expect = 9e-74
Identities = 481/688 (70%), Gaps = 12/688 (2%)
Strand=Plus/Plus
Query 146825 CAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGG 146884
|||| ||||| | ||| || || ||||||| |||| | | ||| | |||||||
Sbjct 1124530 CAAAGTCTTCGAAGCGGAAGTCCTCGATGTCCTGCACCTGACGTTTAATGATCAGCTTGG 1124589
Query 146885 GGAAGGGTCGGGG-GTTC-CTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTA 146942
| |||||||| || || | ||| ||| || ||||| ||||| |||||||| |||||
Sbjct 1124590 GAAAGGGTCGCGGTGTGCGCTG--CAGTTGCTCCTTCAGCGGCTCTACGTGGTTCAGGTA 1124647
Query 146943 GACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGC 147002
|||||| | || |||| |||||| |||||||| |||||||| || || ||||| |||||
Sbjct 1124648 GACGTGTGTATCGCCCATGGTGTGAACAAAGTCGCCCGGCTTCAGACCCGTCACATGGGC 1124707
Query 147003 CACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTC 147062
| ||||| ||||||||| | |||| ||| ||||| ||||| || ||||||||||||||
Sbjct 1124708 AATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTTAAAGGGTACGCCCAGGCCCATGTC 1124767
Query 147063 CCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCG------TCGGCCACGTAAAACTG 147116
| |||||||||||||||||||| ||||| ||| |||| |||||||||||
Sbjct 1124768 GGCGCTTCTCTGGTACAGCTGGCACGACAGCTCACCGCGCTTCTCGGAGACGTAAAACTG 1124827
Query 147117 GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGA 147176
|| | ||||||||||||||| ||||| || | |||| || ||||| |||||
Sbjct 1124828 CGCCAAGCAGTGGCACGGCGGCAGGGCCATCTTTGGGATGTCCAGCGGATTCCAAGCCGA 1124887
Query 147177 GACCACCAGCCGCCTGCTCT-CGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCT 147235
| | | || | | ||| ||| || || | || ||||| || | |||||
Sbjct 1124888 CATGATGATGCGTC-GGTCTGAGGGCTTATTCCTGATGGTGTCGATCACTTGGCGCAGCT 1124946
Query 147236 GGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCC 147295
|||| | ||||| ||| | |||||| ||||| ||||| ||||| || ||||
Sbjct 1124947 GGTCGATGCCCTTGCCGCTGTAGTTATCGTCGCAGGTGCCGTACTGCGCCCCGAAATGCC 1125006
Query 147296 TCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCC 147355
||||||||||||||||||| || ||||| ||||| || | || ||| ||| |
Sbjct 1125007 TCCACTGGAAGCCGTACACCGGGCCCAGATCGCCAACGACTCGGCCCGTGAACCCCATCT 1125066
Query 147356 GCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCT 147415
| || || || ||| | || | ||||||||| ||| ||| || |||
Sbjct 1125067 TGTCCAGGAATTCTCTGGAGCTGTTCCCATCCCAGATGTGCACATTCTTCGCCTGCAGCA 1125126
Query 147416 CCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAA 147475
|| | |||||| ||| | |||||| ||||||||||| ||| | | | |
Sbjct 1125127 GTTTGGCGTCCGTCTTGCCTGCCACGAACCACAGCAGCTCCTCTGCCACCGCGCGGAAGA 1125186
Query 147476 AGACCCTCTTGGTGGTCAGCAGGGGGAA 147503
|||| | ||| |||||||| ||||| ||
Sbjct 1125187 AGACACGCTTCGTGGTCAGGAGGGGAAA 1125214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583380557978400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |