Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18] 14,731 sequences; 166,592,095 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1557 100 9e-16 >seq1557 Length=14215200 Score = 100 bits (110), Expect = 9e-16 Identities = 119/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| ||||| | |||| ||||| | || || || | || || ||||||||| || Sbjct 5422113 TTCGGGGAGCGCATCATCGCCTTTGCCGCCGTGGAGGGCATTTTCTTCAGCGGCAGC-TT 5422055 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 |||||||| |||||| | || ||||| || || |||| || ||||||| ||||| Sbjct 5422054 CGCCTCCATTTTCTGGCTTAAGAAGCGCGGTCTGATGCCTGGATTGACCTTCTCCAACGA 5421995 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCC 443859 |||||| ||| |||||||| ||||| |||||||| ||| Sbjct 5421994 GCTGATCTCTCGCGACGAGGGCTTGCACTGCGACTTTGCC 5421955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588036215974295