Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq1553 91.5 1e-13
>seq1553
Length=5866729
Score = 91.5 bits (100), Expect = 1e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 118465 TTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCA 118524
||||| ||||| | ||| |||| ||||| || | ||| || || || || | || ||
Sbjct 1124622 TTCAGCGGCTCTACGTGGTTCAGGTAGACGTGTGTATCGCCCATGGTGTGAACAAAGTCG 1124681
Query 118525 CCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACA 118584
|| || | || || |||| || |||||||||| || | || |||| ||| |
Sbjct 1124682 CCCGGCTTCAGACCCGTCACATGGGCAATCATGTGGGTGAGCAGGGCGTAGGAGGCGATG 1124741
Query 118585 TTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCC 118644
||||| || || ||||| |||||||| || ||||||||||| ||||| || |||||
Sbjct 1124742 TTAAAGGGTACGCCCAGGCCCATGTCGGCGCTTCTCTGGTACAGCTGGCACGACAGCTCA 1124801
Query 118645 CCG 118647
|||
Sbjct 1124802 CCG 1124804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414402387296284
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |