Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1555 185 2e-41
seq1556 167 5e-36
seq1554 143 6e-29
seq1553 143 6e-29
>seq1555
Length=7220098
Score = 185 bits (204), Expect = 2e-41
Identities = 170/215 (79%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| ||||||||||| || || |||||||| || | ||||| | ||||||
Sbjct 5837929 AGCACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCT 5837870
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || || || || ||||||| |||||| ||||||
Sbjct 5837869 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCC 5837810
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||| || |||||||| || || || ||| ||||| |||||||| |||
Sbjct 5837809 TGAATCTTGGCTTTGACATTTTCGATAGTATCCGACGGTTCGACCTCAAGAGTGATGGTC 5837750
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| |||||||| ||||| || || | |||||| ||
Sbjct 5837749 TTGCCCGTGAGGGTCTTAACGAAGATCTGCATCTT 5837715
>seq1556
Length=7591821
Score = 167 bits (184), Expect = 5e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||| || ||||| || |||||||| ||||||| ||||| | ||||||
Sbjct 3895272 AGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGTCCATCC 3895331
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || || || || || || |||| ||| ||||| |||
Sbjct 3895332 TCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATTCCCTCCTTATCC 3895391
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || || ||||||||||| || |||||||| ||||| |||
Sbjct 3895392 TGAATCTTAGCCTTAACATTCTCAATGGTGTCAGACGGCTCTACCTCGAGGGTGATGGTC 3895451
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || | ||||| ||||| | |||||||||
Sbjct 3895452 TTTCCGGTCAAGGTCTTCACAAAGATCTGCATTTT 3895486
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||| || ||||| || |||||||| ||||| | ||||| | ||| |||
Sbjct 3892992 AGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCT 3893051
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||| |||||||| |||||||| || || || || || || | | ||| ||||| |||
Sbjct 3893052 TCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGGGAGATTCCCTCCTTATCC 3893111
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || ||||||||||| || ||| ||||| |||||||| |||
Sbjct 3893112 TGAATCTTAGCCTTAACATTCTCGATGGTGTCCGACGGTTCTACCTCAAGAGTGATGGTC 3893171
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || | |||||| || || | ||||||
Sbjct 3893172 TTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3893203
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||| || ||||| || |||||||| ||||| | ||||| | ||| ||
Sbjct 3893676 AGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCC 3893735
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || || || || || || || | ||| ||||| |||
Sbjct 3893736 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTATCC 3893795
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || ||||||||||| || ||| ||||| || |||| |||
Sbjct 3893796 TGAATCTTAGCCTTAACATTCTCGATGGTGTCCGACGGTTCTACCTCAAGGTTGATGGTC 3893855
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || | |||||| || || | ||||||
Sbjct 3893856 TTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3893887
>seq1554
Length=6179234
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | |||||| || ||||| || |||||||| || || | || || | ||| ||
Sbjct 592758 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCC 592699
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || |||||||| | || || || || || || | |||||||||||||
Sbjct 592698 TCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCTTCCTTGTCC 592639
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || ||||| || || ||||| || | ||||| |||
Sbjct 592638 TGGATCTTGGCCTTGACGTTCTCAATGGTATCGGATGGCTCAACTTCCAAGGTGATGGTC 592579
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | ||||||
Sbjct 592578 TTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 592547
Score = 140 bits (154), Expect = 8e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||||| || ||||| || |||||||| || || | || || | ||| ||
Sbjct 592530 AGGACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCC 592471
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || |||||||| | || || || || || || | ||| |||||||||
Sbjct 592470 TCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCC 592411
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| |||||||| || || |||||||| | |||||| |||
Sbjct 592410 TGGATCTTGGCCTTGACGTTCTCGATGGTATCGGATGGCTCAACCTCCAAAGTGATGGTC 592351
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || |||||||| || || | ||||| ||
Sbjct 592350 TTGCCGGTCAGAGTCTTAACGAAAATTTGCATATT 592316
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | |||||| || ||||| || |||||||| || || | || || | ||| ||
Sbjct 592986 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCC 592927
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || |||||||| | || || || || || || | ||| |||||||||
Sbjct 592926 TCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCC 592867
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || ||||| || || ||||| || | ||||| |||
Sbjct 592866 TGGATCTTGGCCTTGACGTTCTCAATGGTATCGGATGGCTCAACTTCCAAGGTGATGGTC 592807
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | ||||||
Sbjct 592806 TTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 592775
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | |||||| || ||||| || |||||||| || || | || || | ||| ||
Sbjct 593214 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCC 593155
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || |||||||| | || || || || || || | ||| |||||||||
Sbjct 593154 TCCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCC 593095
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || ||||| || || ||||| || | ||||| |||
Sbjct 593094 TGGATCTTGGCCTTGACATTCTCAATGGTATCGGATGGCTCAACTTCCAAGGTGATGGTC 593035
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | ||||||
Sbjct 593034 TTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 593003
Score = 84.2 bits (92), Expect = 5e-11
Identities = 97/127 (76%), Gaps = 3/127 (2%)
Strand=Plus/Minus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTT-TGGATGTTATAATCCGCAAGGGTCCTTCCATCTT 210963
||| | |||||| || ||||| || |||||||| || || | || || | ||| || |
Sbjct 594281 GACCAAGTGAAGGGTCGACTCCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCT 594222
Query 210964 CCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCT 211023
|||||||||| || |||||||| | || || || || || |||| ||| ||| ||||||
Sbjct 594221 CCAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAA-TCCCTCC-TGTCCT 594164
Query 211024 GGATCTT 211030
|||||||
Sbjct 594163 GGATCTT 594157
>seq1553
Length=5866729
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || |||||||| || || | ||| || | |||||
Sbjct 2325470 AGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 2325411
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || || || || || |||| || ||||| |||
Sbjct 2325410 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTATCC 2325351
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || |||||||||||||| || ||||| | ||||| |||
Sbjct 2325350 TGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCCACCTCCAAGGTGATGGTC 2325291
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || || || | ||||||
Sbjct 2325290 TTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 2325259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158933220564815
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