Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20sechellia_20[refseq_20GCF_5F000005215.3_202006-04-18]
14,731 sequences; 166,592,095 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1555 392 4e-104
>seq1555
Length=7220098
Score = 392 bits (434), Expect = 4e-104
Identities = 1206/1853 (65%), Gaps = 18/1853 (1%)
Strand=Plus/Plus
Query 76770 TTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATA 76829
||||| | || || |||||||| | | | || || || || || |||||||||||
Sbjct 5750468 TTCTTGTTCACGGTGAACTGAATGGCATTCGCAGCTGGCTTGGTGCGCAGATAGTACATT 5750527
Query 76830 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTA 76889
|| ||||| ||||| |||| ||| || || ||| ||||| || ||| |
Sbjct 5750528 CCGGTTTTAAGACCTGCTTTCCAGGAGTAAAAGTGTATGGAAGTCAGCTTTCCATAGTTT 5750587
Query 76890 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 76949
|| ||||| | ||| || || | ||||||||| ||||| ||||| || || | ||| ||
Sbjct 5750588 GGCTCGGCCACATGTATGTTGAACGACTGACTCTGATCTATGAACGCACCACGATCGGCG 5750647
Query 76950 GCCATTTTTATAATGGTCTTT--TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGA 77007
|||||||| || ||| ||| |||| |||||||| | || || | || | |
Sbjct 5750648 GCCATTTTAATCGTGGACTTGACTGAG--ATTTCCCACACCGTCTT--ATACAGATCTCG 5750703
Query 77008 TATCATCTGG---AAGGTTTGTAT--TTTGAATGGAACCACCATCTG-ATATAATTGTAT 77061
| | ||||| | ||| | || ||||||| || || || ||| |||| || |
Sbjct 5750704 CACCTTCTGGGGGATGGTCTCAATGTTTTGAATCGATCC-CCTGCTGGATATGATCTGGT 5750762
Query 77062 TCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAA 77121
|||| || || || | |||||| | | ||| |||| | | | | |||| | || |
Sbjct 5750763 TCTTCATGTCGTCGTCCCACAAGTCCAGCTCGGTTAGGTCGCGCAACAAATGATGGTTGA 5750822
Query 77122 CTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCA 77181
| | || ||||| || |||| |||| || ||||| || || |||| || || || |
Sbjct 5750823 CCACCTGGAATTCGCCGGACAGAACTCGCCGGGTGTATATGTTCGTGGTGTAGGGCTCGA 5750882
Query 77182 CAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATA 77241
||||||||||| |||| || ||||| ||||| ||||| ||||| || || || | |
Sbjct 5750883 AGGATTCATTGTTGCCCATTATCTGAGCCGTAGATGCAGTGGGCATGGGAGCAACGAGCA 5750942
Query 77242 AACTATTTCTGAGACCATGTGTTCTGATTTTA-TCTTTTAGATATTTCCAATCCCAAAGA 77300
|| | || ||| || |||| | | | || || | | | ||| ||||| ||
Sbjct 5750943 GGGAGTTCCGGACACCGTGC-TTCTTAATGGACTCCTTCAATTTCTGCCAGTCCCACAGG 5751001
Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360
| | || || ||||| | ||||| || | |||||| || || | ||
Sbjct 5751002 TTCGTTGGCACCTTGTCCCACATGTCGTACTGCAAAATTCCTTTGCTCACCGGGCTGCCC 5751061
Query 77361 TTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCG 77420
| || ||||| || | ||||| || | || ||||| || || |||||||| || ||
Sbjct 5751062 TCGTAGGTTTCGTATGCACCTTCGGTCTGGGCCAGTTCGCAGCTGGCTTCCAAGGCGCCA 5751121
Query 77421 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGA 77480
|| ||||| |||||||| |||| || ||| | | ||||| || || ||||
Sbjct 5751122 TAGTAAATGGTTTCGAATATCTGCTGATTCAAAAGACCGGCTTCTTCGCTTTCGTACGGG 5751181
Query 77481 TAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGT 77540
|| | | ||||| |||||||| || |||||||||| ||||| || | || | ||
Sbjct 5751182 AAACGCATGAGAATCAAGGCATCAGCGAATCCCTGAATACCAATGCCCACGGGACGGTGC 5751241
Query 77541 CTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTG 77600
||| |||||| | | || || || | |||||||| || || || || || || ||
Sbjct 5751242 CTCAAATTGGACTTCCTTGCCTCCGGCAGGGGATAATAGTTGATATCAATTATCTTGTTT 5751301
Query 77601 AGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA--TCTTC-CA 77657
|||||| | ||||| || || ||||| || || ||||||| | ||||| |
Sbjct 5751302 AGATTTTTGGTAACTATCTTGGTGACTTCCTTGAGCTTCTTAAAATCATACGTCTTCTCC 5751361
Query 77658 TCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCG 77717
| || |||||||| | || || || || | || || ||||| | ||||| |
Sbjct 5751362 GGCGTGACGAACATGTTGAGGGCGATGGAGGCCAAGTTGCAGACTGCAATCTCATCCGGT 5751421
Query 77718 TTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGT 77777
|| ||||| | || || || || | || || || ||||| ||||||| ||| ||
Sbjct 5751422 GAGGAATATTCAACGATTTCCGTGCACAAGTTGCTGCACTTGATGGTGCCCACATTCTGC 5751481
Query 77778 TGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATC 77837
||||||||||| | ||||| | |||||| | || || ||||| | ||||| || |
Sbjct 5751482 TGGTTGCTCTTCCTGTTGCAAGCGTCCTTGAAGAGCATGTACGGATTTCCGGTCTCCACT 5751541
Query 77838 TGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTC 77897
|| | || || || | ||| | | | ||| || | | | ||| || | |
Sbjct 5751542 TGCGCCTCAATGATGGCAAACCACAGGGATTGAGCCTTAACCGTTCGGTTGGCCCGACCC 5751601
Query 77898 TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957
||| || |||| || ||| ||| |||||||| ||||| || || | | |||
Sbjct 5751602 TCTTGCTCGTATTTCTCGTACAGCTTTTCGAATTCATCGCCCCACACTTCGTGGAGACCA 5751661
Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017
|| || | | |||||||| | ||||| ||||| | ||| ||| |||||||| |||
Sbjct 5751662 GGACACTTGTGGGGGCACATGAGCGACCAATCACCGTTGGCCTCAACGCGTTTCATGAAG 5751721
Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTA 78077
||||| |||||||| || || ||| ||||| || | | || ||||| || || ||
Sbjct 5751722 AGATCGGGTATCCACAGGGCGTAAAACAGATCGCGTGCGCGATTCTCTTCTTTGCCCGTG 5751781
Query 78078 TTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCC 78137
||||| || || || || ||||| | | ||| || ||||| ||||| | ||| || ||
Sbjct 5751782 TTCTTCTTCAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGTTCCAAATAAATGGCA 5751841
Query 78138 ATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACT 78197
| | || || || || ||||||||||| | ||| | || ||||| | ||
Sbjct 5751842 AAGGCACCGGGACGCTTGCCGCCTCCCTGATCCACATAACGTGCCACATTATTGAAGACC 5751901
Query 78198 CTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTT 78257
|||| ||| |||| | || || || || |||||||| || |||| | | || ||
Sbjct 5751902 CTCAGCATGGGAACCAACCCATTGGAAGTACCATTTGTGCCGCAAATCGAGGTGCCCTTT 5751961
Query 78258 GCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAA 78317
|| ||||| | | | | || || || || || ||| || || | |||||
Sbjct 5751962 GCACGAATGCAATGCACGTTGAGTCCGATGCCACCGGCGGACTTGGAGATCATGGCGCAT 5752021
Query 78318 CGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAG 78377
||| || | | | | || ||||| || ||| | ||||| | ||||| |||||
Sbjct 5752022 TGTTCCACAGACTTGAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAGAAGGAAACAC 5752081
Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC 78437
|||| || | | || | || ||| | ||| || ||||||||||| ||
Sbjct 5752082 GACGACAACTGCGGCCGGTTTGTGGCAGCGGCAAACAGTGTGGGCGATGCATGCGTGAAG 5752141
Query 78438 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATT 78497
| || || || ||||| || ||||| | || | || || ||| | ||| |||
Sbjct 5752142 TAGCGCTCCGACAGAAGATTATAGGTTTCCACGGCCGCATCGATATCCTCTCCATGGATT 5752201
Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557
|| | ||| || ||||||| ||||||||| |||| || | |||| ||| | ||
Sbjct 5752202 CCGATCGCAACGCGCATCAGCATATGCTGCGGTCGCTCTGCGATCTTTCCGTTTCTCTTG 5752261
Query 78558 AACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 78610
| | || || |||| || || || ||||||||||| || ||||||
Sbjct 5752262 AGAAGATAGGAACGCTCCAGCGTCTTGAAGCCAAAATAGTTATAGCCAAAGTC 5752314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694540885423840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |