Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1170 96.9 3e-15 >seq1170 Length=5152482 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 || ||| | ||||| || | |||||||| | ||||||||||| || ||||| ||| Sbjct 3759262 GGCGAACTGTCCTGTCAGCTGTACCAGAGGAGCGCTGATATGGGCCTGGGCGTACCTTTC 3759203 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACC 19139 ||||| ||| || || || || ||| |||| |||| ||||| || || || ||| || Sbjct 3759202 AACATCGCTTCCTACGCCCTGCTCACCCACATGATAGCCCATGTGACTGGTCTGAAACCC 3759143 Query 19140 GGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTA 19199 || || || ||||||| ||||| || | ||| | ||| | || ||| | || | || Sbjct 3759142 GGCGACTTCGTTCATACCATGGGTGACACGCATGTCTACCTAAACCATGTGGACCCGCTA 3759083 Query 19200 AAAGTGCAGCT 19210 || | |||||| Sbjct 3759082 AAGGAGCAGCT 3759072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399497397697020