Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1170 98.7 8e-16
>seq1170
Length=5152482
Score = 98.7 bits (108), Expect = 8e-16
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511
||| |||| ||||| |||| || | |||||||||||| ||||| || ||||||||
Sbjct 3759259 GAACTGTCCTGTCAGCTGTACCAGAGGAGCGCTGATATGGGCCTGGGCGTACCTTTCAAC 3759200
Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571
|| || || || ||||| || | ||||| || ||||| || | | | ||| | ||
Sbjct 3759199 ATCGCTTCCTACGCCCTGCTCACCCACATGATAGCCCATGTGACTGGTCTGAAACCCGGC 3759140
Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAA 20630
||||| || || ||||| || ||| ||||| | ||||| || ||| | || || ||||
Sbjct 3759139 GACTTCGTTCATACCATGGGTGACACGCATGTCTACCTAAACCATGTGGACCCGCTAAA 3759081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399177402985420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |