Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1170 98.7 8e-16 >seq1170 Length=5152482 Score = 98.7 bits (108), Expect = 8e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 ||| |||| ||||| |||| || | |||||||||||| ||||| || |||||||| Sbjct 3759259 GAACTGTCCTGTCAGCTGTACCAGAGGAGCGCTGATATGGGCCTGGGCGTACCTTTCAAC 3759200 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571 || || || || ||||| || | ||||| || ||||| || | | | ||| | || Sbjct 3759199 ATCGCTTCCTACGCCCTGCTCACCCACATGATAGCCCATGTGACTGGTCTGAAACCCGGC 3759140 Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAA 20630 ||||| || || ||||| || ||| ||||| | ||||| || ||| | || || |||| Sbjct 3759139 GACTTCGTTCATACCATGGGTGACACGCATGTCTACCTAAACCATGTGGACCCGCTAAA 3759081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399177402985420