Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1117 86.0 5e-12 >seq1117 Length=387944 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| || || | || |||| ||| || || ||||| || || ||||||||||||| Sbjct 180073 TCCTCCACGGAGACGGAGCACCAAGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGA 180132 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || | ||| ||||| |||||||| || | || || | || || || ||| Sbjct 180133 CAGAGTGCGTCCATCCTCCAACTGTTTGCCGGCGAAAATGAGACGCTGCTGGTCTGGGGG 180192 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || ||||| || |||| ||| || | | ||| ||||| ||||| Sbjct 180193 GATTCCCTCCTTGTCCTGGATTTTGGCCTTCACATTTTCAATGGTGTCGGAAGGCTCCAC 180252 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTT 18327 || | ||||||| | || || ||||| ||||| ||||| || ||||||| Sbjct 180253 CTCCAGGGTGATGGTCTTTCCAGTCAAGGTTTTCACAAAGATCTGCATTT 180302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379337730866220