Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq991 141 9e-29 >seq991 Length=691118 Score = 141 bits (156), Expect = 9e-29 Identities = 339/513 (66%), Gaps = 0/513 (0%) Strand=Plus/Plus Query 37111 AGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTA 37170 || || ||||| ||||| | || || ||||| || || || || | || | || |||| Sbjct 358041 AGATCCCTCAACAGGTGGTGGTTAACCACCTGGAATTCGCCGGAGAGAACGCGTCGTGTA 358100 Query 37171 TATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGAT 37230 || ||||| | || || || || | ||| || ||||| | | ||| || | || ||| Sbjct 358101 TAGATATTTGTGGTGTACGGCTCGAAGGATTCGTTATTGCCCATTATCTGGGCAGTGGAT 358160 Query 37231 GCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTT 37290 || || ||||| || || | || || || || | |||||| | || || || Sbjct 358161 GCCGTTGGCATGGGGGCGACCAGCAGAGAGTTCCTGACACCATGTTTCTTGATCGACTCC 358220 Query 37291 TTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGA 37350 || || | ||| ||||| | | |||||| ||| ||||||||| || || ||| Sbjct 358221 TTCAGCTTGGCCCAGTCCCAGAGGTTCGTTGGGACCTTGTCCCACATATCGTACTGAAGA 358280 Query 37351 ATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGT 37410 || || || || | ||| | | ||||| ||||| || || | | || ||| Sbjct 358281 ATTCCCTTGCTTACGGGACTGCCCTCGTATGTTTCATACGGACCTTCGGCCTGGGCCAGT 358340 Query 37411 TCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATT 37470 || ||||| | ||| |||||| ||||||| || ||||| || || || |||| | Sbjct 358341 TCACAACTTGCTTCCAGTGCGCCATAATAGATAGTTTCAAAGATCTGCTGGTTTAGGAGA 358400 Query 37471 TTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGA 37530 ||| || ||||| ||| | | | | || | || || ||||||| ||||||||| Sbjct 358401 CCTGCCTCCTCGCTTTCGTAAGGGAATCTCATCAGAATCAAGGCATCAGCAAAACCCTGA 358460 Query 37531 ACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAA 37590 | || || || ||||| | ||| || ||| ||| | | ||| || |||||| Sbjct 358461 ATGCCAATGCCAATGGGGCGATGCCTCAAATTTGATTTCCGGGCCTCTGGCAGGGGATAA 358520 Query 37591 TAATTGATATCTATTATTTTATTTAGATTTTTA 37623 |||||||| || || || ||||| ||||| ||| Sbjct 358521 TAATTGATGTCAATAATCTTATTCAGATTCTTA 358553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468516858504640