Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq98 86.0 5e-12 >seq98 Length=20832 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || ||||| || || || || |||||||| ||| ||| | | | || || Sbjct 11186 ACCAAGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCCTCC 11245 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 || |||||||| ||| | || | ||| || ||||| | || ||||| || ||||| Sbjct 11246 AACTGTTTGCCGGCGAAAATGAGACGCTGCTGGTC-TGGGGGATTCCCTCCTTGTCTTGG 11304 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| || | || ||||| ||| | || || || ||||||||||| || Sbjct 11305 ATCTTGGCCTTCACGTTCTCGATGGTGTCGGAAGGCTCCACCTCCAAGGTAATGGTCTTG 11364 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || ||||| || || || || ||||| Sbjct 11365 CCAGTAAGAGTCTTCACGAAGATCTGCAT 11393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362173214535996