Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq991 351 3e-91
>seq991
Length=691118
Score = 351 bits (388), Expect = 3e-91
Identities = 1142/1750 (65%), Gaps = 49/1750 (3%)
Strand=Plus/Minus
Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492
||||| | ||||| || || ||||| |||||| ||||||| || || ||||| ||||||
Sbjct 359497 AATGGCAAGATTGTCGAGCGGCCGCAACATATGCTAATGCGCGTGGCGATTGGAATCCAT 359438
Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAA---GCT-TCTAAGTGCTCGTGTATT 363548
| ||| | |||||||| |||| || || || ||| || || ||| | ||
Sbjct 359437 GGTGAAGATATCGATGCCGCTGTTGAGACCTACAATTTGCTGTCAGAGCGCT----TCTT 359382
Query 363549 CACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTG 363608
||| |||||| | || || ||| | |||| ||| || || | || || ||
Sbjct 359381 CACACACGCCTCACCCACTCTGTTCGCCGCTGCCACTAACCGACCGCAACTCTCGTCCTG 359322
Query 363609 CTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTG 363668
||| ||||| | |||| |||||| ||||| ||||| || | | | | | ||
Sbjct 359321 CTTCCTTCTGACTATGACATCCGATTCGATCGAAGGTATTTTCAAGTCGGTGGAACACTG 359262
Query 363669 TGCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCA 363726
||| | ||||||||| || ||||| ||||| || || |||| | |||||
Sbjct 359261 TGCCATGATTTCCAAGTCGGCGGGCGGCATTGGCCTGAATG--TCCATTGCATCCGTGCC 359204
Query 363727 CAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785
|| || | || | ||||| | |||| ||| ||||| || ||||||||||| ||
Sbjct 359203 AAGGGCACCTCGATATGTGGCACGAATGGGAC-CTCCAATGGCCTCGTTCCCATGCTGCG 359145
Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845
|| || ||||| ||| | ||||| || |||||||| || |||||| || || ||
Sbjct 359144 AGTCTTCAACAATGTAGCGCGTTACGTGGATCAGGGTGGCGGCAAGCGCCCTGGCGCCTT 359085
Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905
||| || || | ||||| ||| ||||| ||||||| || | || || ||| ||
Sbjct 359084 TGCCATCTACTTGGAGCCCTGGCATTCCGATGTTTTTGAATTCTTGGAACTGAAGAAGAA 359025
Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965
||| || || || || ||||| || ||| | || ||||| || ||| | |||| |
Sbjct 359024 CACCGGTAAGGAAGAGAATCGTGCTCGCGATTTATTTTATGCCCTCTGGATACCTGATCT 358965
Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025
|||||||||||||| |||||| | |||| ||||| || | ||||| ||| | |||||
Sbjct 358964 CTTTATGAAGCGCGTTGAGGCAAATGAGAACTGGTCGCTGATGTGCCCGCACAAGTGTCC 358905
Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085
|| || ||||| ||||| ||||| | || | ||| || || || | ||
Sbjct 358904 CGGCCTGCAGGATGTTTGGGGCGACGAATTTGACCAATTGTACCTCAAATACGAGGCCGA 358845
Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145
||||| || | ||| || || ||| || ||||| |||||||| || ||||
Sbjct 358844 AGGAAAAGCCAATCGGACGGTTAAGGCTCAGTCCCTGTGGTTCGCCATCATTGAGGCGCA 358785
Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205
| | ||||| || | || |||||| ||| ||| ||| | |||||| | ||| ||| ||
Sbjct 358784 GGTGGAGACTGGCAATCCTTATATGCTGTTCAAGGATGCATGCAACAGGAAGAGCAATCA 358725
Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265
|||| | |||| || || || || || || || || || || |||| || | |
Sbjct 358724 GCAGAATGTTGGCACCATCAAGTGCAGTAATCTTTGCACAGAAATCGTTGAGTATTCGTC 358665
Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---- 364321
|||||||| | ||||| || ||||| || || ||||| || ||| || |
Sbjct 358664 GCCCGACGAAATCGCCGTTTGCAACCTGGCATCCATCGCTCTCAACATGTTCGTGACCCC 358605
Query 364322 -AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAAT 364380
||| | || | ||| || | || | || || || | | || |||
Sbjct 358604 TGAGAAG--ACGTACGACTTTAAGAAACTGAAGGAGGTCACTAAGACAGTGGCTAAGAAT 358547
Query 364381 CTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATG 364440
|| | ||| |||| |||| ||||||||||| | || || ||| | || ||| ||
Sbjct 358546 CTGAATAAGATTATTGACATCAATTATTATCCCCTGCCAGAGGCCCGGAAATCAAATTTG 358487
Query 364441 CGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG 364500
| |||||||| ||||| |||| | ||||| | ||||| | || || || | ||
Sbjct 358486 AGGCATCGCCCCATTGGCATTGGCATTCAGGGTTTTGCTGATGCCTTGATTCTGAT-GAG 358428
Query 364501 ATGGCATT-TGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559
|| | || || || || || | ||||| || ||||||||||||| || ||
Sbjct 358427 ATTCCCTTACGAAAGCGAGGAGGCAGGTCTCCTAAACCAGCAGATCTTTGAAACTATCTA 358368
Query 364560 TTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTA 364619
|| || |||| || || ||||| |||| | || | || ||| || ||
Sbjct 358367 TTATGGCGCACTGGAAGCAAGTTGTGAACTGGCCCAGGCCGAAGGTCCGTATGAAACATA 358308
Query 364620 TGAGGG--GTCCCCTCTTTCGC-AGGGAAAATTCCAGTTTGATCTATGG---AATGTCAC 364673
||||| |||| | | || |||||| | |||| ||| | ||| || |||
Sbjct 358307 CGAGGGCAGTCC---CGTAAGCAAGGGAATTCTTCAGTACGATATGTGGGACAAGGTC-- 358253
Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACT 364731
||| | || ||| |||||| | ||| | | | | | ||||| ||||||
Sbjct 358252 -CCAACGAACCTCTGGGACTGGGCCAAGCTGAAGGAGTCGA--TCAAGAAACATGGTGTC 358196
Query 364732 CGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAAC 364791
| ||||| || | || |||||||| ||||| || ||||| ||||| | || ||
Sbjct 358195 AGGAACTCTCTGCTGGTCGCCCCCATGCCAACGGCATCCACTGCCCAGATAATGGGCAAT 358136
Query 364792 AACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAA 364851
||||| | |||||| |||| || | ||| | ||| |||| || ||||| ||||| |||
Sbjct 358135 AACGAATCCTTCGAGCCGTACACCACAAATATCTATACACGACGCGTTCTCTCCGGCGAA 358076
Query 364852 TTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGAC 364911
|| | ||| ||||| | |||| | | |||||| | || | | |||||| |||
Sbjct 358075 TTCCAGGTGGTTAACCACCACCTGTTGAGGGATCTGACGGAGCTTGACTTGTGGGATGAT 358016
Query 364912 AGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCA 364971
||||||||| | || || || ||| || | ||||| | || ||| |||
Sbjct 358015 GATATGAAGAACCAGATAATTTCCAGCCGTGGCTCAATTCAGAATA-TCGAGGCCATCCC 357957
Query 364972 GAAG-ATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC--TCATT 365028
|| || || | | ||||| || || ||||| || ||| | || || ||||
Sbjct 357956 CCAGCATGTGCGCGATCTGTACAAGACGGTGTGGGAGATCTCC--GTCAAGTCCACCATT 357899
Query 365029 GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATG 365088
| ||||| || ||||| ||||| || ||| |||||| || ||||| ||| |||||||
Sbjct 357898 AAAATGGCTGCGGATCGTGGTGCATTCATCGATCAGAGTCAATCGTTCAAC--ATTCATG 357841
Query 365089 --ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTC 365146
| |||| | || | |||||| || ||||| ||||| ||| |||||| | || |
Sbjct 357840 TTGCCGAGCCCAACTATGGCAAGCTGACGTCCATACATTTTTACTCGTGGAAGGCTGGCC 357781
Query 365147 TTAAGACAGG 365156
|||| || ||
Sbjct 357780 TTAAAACCGG 357771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303330955860392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |