Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq817 89.7 1e-14
>seq817
Length=4525942
Score = 89.7 bits (98), Expect = 1e-14
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393
|||||| || |||||||| | | || |||||| || |||||||||||||| ||
Sbjct 2293925 CCCATGGCCCGGGTCTTTCCCAAGGTAACCAAATGTACCTTCCACAAATACGGTCCCTCC 2293866
Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453
||| || | || | ||| ||||| ||| | || || ||| | ||||| ||||||
Sbjct 2293865 GGCAATGTGCAGAAGTTCGATGGACTGTGCGTGCTGCCCCTGAATATTGTCAATGAGAAG 2293806
Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480
|||||| | ||||| ||||||||||||
Sbjct 2293805 ATCTACGTGTTCCTTTGGTTCTGGTTC 2293779
Score = 82.4 bits (90), Expect = 2e-12
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426
|| || || |||||||| ||| |||| || |||||| | || |||| || ||||||
Sbjct 2330332 TGCACCTTCCACAAATATGGTGCTTCTGGATCCCTGCAGAAGCACGACTCCCTTTGCATC 2330391
Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCT 3481
|| ||| |||| | ||||||||||||| || | ||| | |||||||||||||
Sbjct 2330392 CTGCCGCTGAACATTGTCAACGAGAAGACATATGTGTTCATTTGGTTCTGGTTCT 2330446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12479814906000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |