Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq1170 143 2e-29
>seq1170
Length=5152482
Score = 143 bits (158), Expect = 2e-29
Identities = 346/517 (67%), Gaps = 10/517 (2%)
Strand=Plus/Plus
Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194
||||| | || || |||||| ||||||| | ||| || || | ||| || ||||
Sbjct 3759048 GGAAACGTGCGCGGCGTGCGCTGCAGCTGCTCCTTTAGCGGGTCCACATGGTTTAGGTAG 3759107
Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254
| || | || |||| || |||| || || |||||| | |||||||| ||||| ||
Sbjct 3759108 ACATGCGTGTCACCCATGGTATGAACGAAGTCGCCGGGTTTCAGACCAGTCACATGGGCT 3759167
Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314
| ||| | || | |||| ||| || ||||| ||||| || |||| ||||| ||
Sbjct 3759168 ATCATGTGGGTGAGCAGGGCGTAGGAAGCGATGTTGAAAGGTACGCCCAGGCCCATATCA 3759227
Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCACC---GTCA---GCTACATAAAATTGA 20368
| |||||| |||||||||||||| || || || ||| | || | |||||
Sbjct 3759228 GCGCTCCTCTGGTACAGCTGACAGGACAGTTCGCCACGGTCCTGGGAGACGAAGAATTGC 3759287
Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACAC 20428
| |||| || ||||| | ||||| | | |||| || ||||| ||| ||
Sbjct 3759288 GCCAGGCAGTGGCATGGCGGCAATGCCATTTTTGGTATGTCCAGGGGATTCCATGCAGAC 3759347
Query 20429 ATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGT-ACGACAATTG 20487
|| || || | || || |||||| |||||||| || | | | ||| ||| ||
Sbjct 3759348 ATGATAATGCGCCTGTCCGACGGATTGGTTTTTATTGTCTCGATCACCTGACG-CAACTG 3759406
Query 20488 GTCAAACCCCTGGCCTGTATAGTCAGCATC-CGCGTCCACGTACGCCGCCCCAAAGTGCC 20546
||| | |||||||| | ||||| | | | ||||| |||| | |||||||| ||||
Sbjct 3759407 GTCGATGCCCTGGCCGCTGTAGTCGTCGTTGCACGTCCG-GTACTCTGCCCCAAAATGCC 3759465
Query 20547 TCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCC 20606
|||||| || ||||| || || |||||||| || | | || || | || ||
Sbjct 3759466 GCCACTGAAAGCCGTATACTGGACCCAAATCGCCAACAGCCCGGTCCGTATGACCAAGCT 3759525
Query 20607 CGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATAT 20643
| ||||||||||||||| || || |||||||||
Sbjct 3759526 TGTCCAGGAACTCCCTGGTGCTGTTCCCGTCCCATAT 3759562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441365318731040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |