Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq991 132 1e-25
seq98 129 1e-24
seq1117 127 5e-24
seq264 123 6e-23
seq71 114 3e-20
seq118 104 6e-17
>seq991
Length=691118
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || | ||| | ||| || || || || |||||||| | |
Sbjct 450727 CCACCACGAAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGAATGTTATAGTCAGAG 450668
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | || || || || |||||||||||||| ||| |||||
Sbjct 450667 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGA---TCTGGA 450611
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||||||||| ||||| || || ||||| || ||||| |||| || || |||
Sbjct 450610 GGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGACGGTTCG 450551
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| || || || ||||| ||||| ||||||||
Sbjct 450550 ACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 450501
>seq98
Length=20832
Score = 129 bits (142), Expect = 1e-24
Identities = 146/194 (75%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| ||||| || | || ||||| || || || | || || || |||||
Sbjct 12568 TTCCTTTTGGATGTTATAATCAGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 12627
Query 288342 GATCAGACGCTGTTGAGAATCTGGG-ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGT 288400
||||| |||||| || |||||| ||||| || || ||||||||||| || |||||||
Sbjct 12628 GATCAAACGCTGCTGG---TCTGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGT 12684
Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460
| || || | ||| | || || || || ||||| ||||| || || |||||||| |
Sbjct 12685 TCTCAATGGTGTCGGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAGTCTTCA 12744
Query 288461 CGAATATCTGCATT 288474
|||| |||||||||
Sbjct 12745 CGAAGATCTGCATT 12758
Score = 125 bits (138), Expect = 2e-23
Identities = 146/196 (74%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| ||||| || | || ||||| || || || | || || || |||||
Sbjct 11658 TTCCTTCTGGATGTTATAATCAGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 11717
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||||| |||||| || |||||| ||||| || || ||||||||||| || |||||
Sbjct 11718 GATCAAACGCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCAC 11774
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||| || || | ||| | || || || || ||||| ||||| || |||||||||||
Sbjct 11775 GTTCTCAATGGTGTCGGAAGGCTCCACCTCTAGGGTGATGGTCTTGCCAGTCAGAGTCTT 11834
Query 288459 GACGAATATCTGCATT 288474
||||| |||||||||
Sbjct 11835 CACGAAGATCTGCATT 11850
Score = 123 bits (136), Expect = 6e-23
Identities = 145/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||||| || |||||||| || || | ||||| || |||||
Sbjct 12341 TCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAA 12400
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| |||||||| || |||||| ||||| || || ||||||||||| || |||||
Sbjct 12401 ATGAGACGCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACA 12457
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
||||| || | ||| | || || || || ||||| ||||| || || ||||||||
Sbjct 12458 TTTTCAATGGTGTCGGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGAGTCTTC 12517
Query 288460 ACGAATATCTGCATT 288474
||||| |||||||||
Sbjct 12518 ACGAAGATCTGCATT 12532
Score = 120 bits (132), Expect = 7e-22
Identities = 145/196 (74%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| ||||| || | || ||||| || || || | || || || |||||
Sbjct 8924 TTCCTTCTGGATGTTATAATCAGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 8983
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||||| |||||| || |||||| ||||| || || ||||||||||| || |||||
Sbjct 8984 GATCAAACGCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCAC 9040
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||| || || | ||| | || || || || ||||| ||||| || || ||||||||
Sbjct 9041 GTTCTCAATGGTGTCGGAAGGCTCCACCTCTAGGGTGATGGTCTTGCCAGTGAGAGTCTT 9100
Query 288459 GACGAATATCTGCATT 288474
||||| |||||||||
Sbjct 9101 CACGAAGATCTGCATT 9116
Score = 118 bits (130), Expect = 3e-21
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || ||||| || | || |||||||| || || | || || || ||||||
Sbjct 9610 TCCTTCTGAATGTTATAATCCGACAGGGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAG 9669
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||| || |||||| ||||| || || ||||||||||| || ||||||
Sbjct 9670 ATCAAACGCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACG 9726
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || || ||||| ||||| || || ||||||||
Sbjct 9727 TTCTCGATGGTGTCGGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGAGTCTTC 9786
Query 288460 ACGAATATCTGCATT 288474
||||| |||||||||
Sbjct 9787 ACGAAGATCTGCATT 9801
Score = 118 bits (130), Expect = 3e-21
Identities = 166/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || ||||| | || || ||||||| || || || || || || |||||||
Sbjct 10484 TCCTCCACGGAGACGGAGCACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 10543
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| |||||||| || || | ||||| || || || || |||||||| || |||||
Sbjct 10544 CAGAGTGCGTCCATCCTCCAGCTGTTTGCCGGCAAAAATGAGACGCTGCTGG---TCTGG 10600
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| ||||| || || ||||||||||| || ||||| ||||| || | ||| | ||
Sbjct 10601 GGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACATTTTCAATGGTGTCGGAAGGCTC 10660
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || | || || ||||| || || |||||||| ||||| |||||||||
Sbjct 10661 CACCTCCAAAGTAATGGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCATT 10712
Score = 118 bits (130), Expect = 3e-21
Identities = 166/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || ||||| | || || ||||||| || || || || || || |||||||
Sbjct 11394 TCCTCCACGGAGACGGAGCACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 11453
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| |||||||| || || | ||||| || || || || |||||||| || |||||
Sbjct 11454 CAGAGTGCGTCCATCCTCCAGCTGTTTGCCGGCAAAAATGAGACGCTGCTGG---TCTGG 11510
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| ||||| || || ||||||||||| || ||||| ||||| || | ||| | ||
Sbjct 11511 GGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACATTTTCAATGGTGTCGGAAGGCTC 11570
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || | || || ||||| || || |||||||| ||||| |||||||||
Sbjct 11571 CACCTCCAAAGTAATGGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCATT 11622
Score = 109 bits (120), Expect = 1e-18
Identities = 140/192 (73%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||||| || |||||||| || || | || || || || ||
Sbjct 11887 TCCTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCATCCTCCAGCTGCTTGCCGGCAAAA 11946
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || | | |||||||| || || ||||||||||| || ||||| |||
Sbjct 11947 ATGAGACGCTGCTG-GTCTGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACATTT 12005
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| | || || || | || || ||||| || || |||||||| |||
Sbjct 12006 TCAATGGTGTCGGAAGGCTCCACCTCCAAAGTAATGGTCTTGCCAGTGAGAGTCTTCACG 12065
Query 288463 AATATCTGCATT 288474
|| |||||||||
Sbjct 12066 AAGATCTGCATT 12077
Score = 107 bits (118), Expect = 5e-18
Identities = 150/208 (72%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| ||||| || | || |||||||| || || | || || || |||||
Sbjct 12794 TTCCTTCTGGATGTTATAATCCGACAGGGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAA 12853
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|| |||||||| || |||||| ||||| || || ||||||||||| || |||||
Sbjct 12854 AATGAGACGCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCAC 12910
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||||| || | ||| | || || || || ||||| ||||| || |||| || ||
Sbjct 12911 ATTTTCAATGGTGTCGGAAGGCTCCACCTCCAGGGTGATGGTCTTTCCAGTCAAGGTTTT 12970
Query 288459 GACGAATATCTGCATTATG--TTATTCT 288484
|| || ||||||||| | |||||||
Sbjct 12971 CACAAAGATCTGCATTTCGGATTATTCT 12998
>seq1117
Length=387944
Score = 127 bits (140), Expect = 5e-24
Identities = 146/195 (75%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || |||||||||| || |||||||| || || | || || || ||||||
Sbjct 174182 TCCTTCTGAATGTTATAGTCGGACAGGGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAG 174241
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||| || |||||| ||||| || || ||||||||||| || ||||||
Sbjct 174242 ATCAAACGCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACG 174298
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| | || || || || ||||| ||||| || || ||||||||
Sbjct 174299 TTCTCAATGGTGTCGGAAGGCTCCACCTCTAGGGTGATGGTCTTGCCAGTGAGAGTCTTC 174358
Query 288460 ACGAATATCTGCATT 288474
||||| |||||||||
Sbjct 174359 ACGAAGATCTGCATT 174373
Score = 127 bits (140), Expect = 5e-24
Identities = 168/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || ||||| | || || ||||||| || || || || || || |||||||
Sbjct 177109 TCCTCCACGGAGACGGAGCACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 177168
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| |||||||| || || | ||||| || || || || |||||||| || |||||
Sbjct 177169 CAGAGTGCGTCCATCCTCCAGCTGTTTGCCGGCAAAAATGAGACGCTGCTGG---TCTGG 177225
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| ||||| || || ||||||||||| || |||||||| || || | ||| | ||
Sbjct 177226 GGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCAATGGTGTCGGAAGGCTC 177285
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || ||||| ||||| || || |||||||| ||||| |||||||||
Sbjct 177286 CACCTCTAGGGTGATGGTCTTGCCAGTGAGAGTCTTCACGAAGATCTGCATT 177337
Score = 127 bits (140), Expect = 5e-24
Identities = 168/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || ||||| | || || ||||||| || || || || || || |||||||
Sbjct 178021 TCCTCCACGGAGACGGAGCACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 178080
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| |||||||| || || | ||||| || || || || |||||||| || |||||
Sbjct 178081 CAGAGTGCGTCCATCCTCCAGCTGTTTGCCGGCAAAAATGAGACGCTGCTGG---TCTGG 178137
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| ||||| || || ||||||||||| || |||||||| || || | ||| | ||
Sbjct 178138 GGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCAATGGTGTCGGAAGGCTC 178197
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || ||||| ||||| || || |||||||| ||||| |||||||||
Sbjct 178198 CACCTCTAGGGTGATGGTCTTGCCAGTGAGAGTCTTCACGAAGATCTGCATT 178249
Score = 127 bits (140), Expect = 5e-24
Identities = 168/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || ||||| | || || ||||||| || || || || || || |||||||
Sbjct 179161 TCCTCCACGGAGACGGAGCACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 179220
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| |||||||| || || | ||||| || || || || |||||||| || |||||
Sbjct 179221 CAGAGTGCGTCCATCCTCCAGCTGTTTGCCGGCAAAAATGAGACGCTGCTGG---TCTGG 179277
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| ||||| || || ||||||||||| || |||||||| || || | ||| | ||
Sbjct 179278 GGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCAATGGTGTCGGAAGGCTC 179337
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || ||||| ||||| || || |||||||| ||||| |||||||||
Sbjct 179338 CACCTCTAGGGTGATGGTCTTGCCAGTGAGAGTCTTCACGAAGATCTGCATT 179389
Score = 122 bits (134), Expect = 2e-22
Identities = 153/208 (74%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| || ||||||| || |||||||| || || || ||||| || |||||
Sbjct 180109 TTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCCTCCAACTGTTTGCCGGCGAA 180168
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|| |||||||| || |||||| ||||| || || ||||||||||| || |||||
Sbjct 180169 AATGAGACGCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCAC 180225
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||||| || | ||| | || || || || ||||| ||||| || |||| || ||
Sbjct 180226 ATTTTCAATGGTGTCGGAAGGCTCCACCTCCAGGGTGATGGTCTTTCCAGTCAAGGTTTT 180285
Query 288459 GACGAATATCTGCATTATG--TTATTCT 288484
|| || ||||||||| | |||||||
Sbjct 180286 CACAAAGATCTGCATTTCGGATTATTCT 180313
Score = 111 bits (122), Expect = 4e-19
Identities = 143/196 (73%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| ||||| || | || ||||| || || || | || || || |||||
Sbjct 175549 TTCCTTCTGGATGTTATAATCCGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 175608
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||||| |||||| || |||||| ||||| || || ||||||||||| || |||||
Sbjct 175609 GATCAAACGCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCAC 175665
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||| || || | ||| | || || || | || || ||||| || || ||||||||
Sbjct 175666 GTTCTCAATGGTGTCGGAAGGCTCCACCTCCAAAGTAATGGTCTTGCCAGTAAGAGTCTT 175725
Query 288459 GACGAATATCTGCATT 288474
||||| |||||||||
Sbjct 175726 CACGAAGATCTGCATT 175741
Score = 102 bits (112), Expect = 2e-16
Identities = 141/196 (72%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| ||||| || | || ||||| || || || | || || || || ||
Sbjct 174409 TTCCTTCTGGATGTTATAATCCGACAGGGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAA 174468
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|| |||||||| || |||||| ||||| || || ||||||||||| || |||||
Sbjct 174469 AATGAGACGCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCAC 174525
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||| || || | ||| | || || || | || || ||||| || || ||||||||
Sbjct 174526 GTTCTCAATGGTGTCGGAAGGCTCCACCTCCAAAGTAATGGTCTTGCCAGTAAGAGTCTT 174585
Query 288459 GACGAATATCTGCATT 288474
||||| |||||||||
Sbjct 174586 CACGAAGATCTGCATT 174601
>seq264
Length=2409178
Score = 123 bits (136), Expect = 6e-23
Identities = 170/235 (72%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||||||||| | || || | || | ||| || || ||||| || || |
Sbjct 1045264 CATG-CCACCGCGGAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAAT 1045206
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || || |||||||| || | || ||||| ||||||||||||||||| || |
Sbjct 1045205 CGGACAGGGTACGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GT 1045149
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| || || || || |||||||| || || || ||||| || || | ||| |
Sbjct 1045148 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGG 1045089
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| ||||||| |||||| ||||| || |||||
Sbjct 1045088 GCTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAAGTCTTTACGAAGATTTGCAT 1045034
Score = 123 bits (136), Expect = 6e-23
Identities = 170/235 (72%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||||||||| | || || | ||| | ||| || || ||||| || ||||
Sbjct 1045492 CATG-CCACCGCGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGT 1045434
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | || ||||| || || || | || ||||| ||||||||||||||||| || |
Sbjct 1045433 CAGAAAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GT 1045377
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| || || || || |||||||| || || || ||||| || || | || |
Sbjct 1045376 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGG 1045317
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| ||||||| ||||||||| || ||||||||
Sbjct 1045316 GCTCGACCTCAAGGGTGATAGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 1045262
Score = 123 bits (136), Expect = 6e-23
Identities = 170/235 (72%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| |||||||| || | || || | || | ||| || || ||||| || || |
Sbjct 1045720 CATG-CCACCGCGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAAT 1045662
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || || |||||||| || | || ||||| ||||||||||||||||| || |
Sbjct 1045661 CGGACAGGGTACGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GT 1045605
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| || || || || |||||||| || || || ||||| || || | ||| |
Sbjct 1045604 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGG 1045545
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| ||||||| ||||||||| || ||||||||
Sbjct 1045544 GCTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 1045490
Score = 123 bits (136), Expect = 6e-23
Identities = 170/235 (72%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||||||||| | || || | || | ||| || || ||||| || || |
Sbjct 1045948 CATG-CCACCGCGGAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAAT 1045890
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || || |||||||| || | || ||||| ||||||||||||||||| || |
Sbjct 1045889 CGGACAGGGTACGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GT 1045833
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| || || || || |||||||| || || || ||||| || || | || |
Sbjct 1045832 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCCGAGG 1045773
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| ||||||| ||||||||| || ||||||||
Sbjct 1045772 GCTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 1045718
Score = 123 bits (136), Expect = 6e-23
Identities = 170/235 (72%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| |||||||| || | || || | || | ||| || || ||||| || || |
Sbjct 1046860 CATG-CCACCGCGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAAT 1046802
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || || |||||||| || | || ||||| ||||||||||||||||| || |
Sbjct 1046801 CGGACAGGGTACGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GT 1046745
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| || || || || |||||||| || || || ||||| || || | ||| |
Sbjct 1046744 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGG 1046685
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| ||||||| ||||||||| || ||||||||
Sbjct 1046684 GCTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 1046630
Score = 120 bits (132), Expect = 7e-22
Identities = 169/235 (72%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||||||||| | || || | || | ||| || || ||||| || || |
Sbjct 1046176 CATG-CCACCGCGGAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAAT 1046118
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || || |||||||| || | || ||||| ||||||||||||||||| || |
Sbjct 1046117 CGGACAGGGTACGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GT 1046061
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| || || || || |||||||| || || || ||||| || || | || |
Sbjct 1046060 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCCGAGG 1046001
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| || |||| ||||||||| || ||||||||
Sbjct 1046000 GCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 1045946
Score = 120 bits (132), Expect = 7e-22
Identities = 169/235 (72%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||||||||| | || || | || | ||| || || ||||| || ||||
Sbjct 1046632 CATG-CCACCGCGGAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 1046574
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | || ||||| || || || | || ||||| ||||||||||||||||| || |
Sbjct 1046573 CAGAAAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GT 1046517
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| || || || || |||||||| || || || ||||| || || | || |
Sbjct 1046516 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGG 1046457
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| ||||||| ||||||||| || ||||||||
Sbjct 1046456 GCTCGACCTCAAGGGTGATAGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 1046402
Score = 118 bits (130), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| ||||| || | || || | ||| | ||| || || ||||| || || ||||
Sbjct 1047312 CCGCCGCGCAGACGCAGAACCAAATGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGAC 1047253
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || |||||||| || | || ||||| ||||||||||||||||| || ||||||
Sbjct 1047252 AGGGTACGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GTCTGGG 1047196
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || |||||||| || || || ||||| || || | || | ||
Sbjct 1047195 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCCGAGGGCTCG 1047136
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| ||||||| ||||||||| || ||||||||
Sbjct 1047135 ACCTCAAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 1047086
Score = 114 bits (126), Expect = 3e-20
Identities = 168/235 (71%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||||||||| | || || | || | ||| || || ||||| || ||||
Sbjct 1046404 CATG-CCACCGCGGAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 1046346
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | || ||||| || || || | || ||||| ||||||||||||||||| || |
Sbjct 1046345 CAGAAAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GT 1046289
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| || || || || |||||||| || || || ||||| || || | || |
Sbjct 1046288 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCCGAGG 1046229
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| || |||| ||||||||| || ||||||||
Sbjct 1046228 GCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 1046174
Score = 111 bits (122), Expect = 4e-19
Identities = 167/235 (71%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| |||||||| || | || || | || | ||| || || ||||| || ||||
Sbjct 1047088 CATG-CCACCGCGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 1047030
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | || ||||| || || || | || ||||| ||||||||||||||||| || |
Sbjct 1047029 CAGAAAGAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GT 1046973
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| || || || || |||||||| || || || ||||| || || | || |
Sbjct 1046972 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCCGAGG 1046913
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| || |||| ||||||||| || ||||||||
Sbjct 1046912 GCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 1046858
>seq71
Length=15183
Score = 114 bits (126), Expect = 3e-20
Identities = 237/349 (68%), Gaps = 8/349 (2%)
Strand=Plus/Minus
Query 72447 GTGCAAGAAATTCCTCAGACGGAAAATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTT 72506
||||| |||| || || | ||||| || || || |||| || ||||| |||| |||
Sbjct 4040 GTGCAGGAAACACCGCAAAAGGAAACAACACCTTTCCATCCGCGCAGCCCCTACGCTGTG 3981
Query 72507 GCAAAGTTGTACGCTTATTGGAT--CTGTAAAAATTACCGTGAGTCGTATAACATGTATG 72564
|| || |||||||||| ||||| | ||||| |||||||||| | || | |||||||
Sbjct 3980 GCTAAAATGTACGCTTACTGGATTACCGTAAA--TTACCGTGAGGCTTACGATATGTATG 3923
Query 72565 TATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACAGAGGCCATCAGTTCGTGACTC 72624
|| ||| ||||| || || || || || || | || | || || || |
Sbjct 3922 CCTGTAACGGGATTTTGTTTAACCATGAAAGCCCGCGTCGTGGTGAAACATTTGTAACAC 3863
Query 72625 GTAAAATCACGAAGGTGGTCGCGAATATTTTCAATGGTGTCGAAAAATGCATGTATCTCG 72684
| ||||| ||| | | | || |||||| |||| | ||||||||| |||| | |
Sbjct 3862 GCAAAATTACGCGTGGGCTGGCCAATATTGCTGTTGGTCTGGAAAAATGCCTGTACATGG 3803
Query 72685 GTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGT--AGAAGCAATGTG 72742
| ||||| | | || ||||| |||| || |||||||| | |||| ||
Sbjct 3802 GGAATATCAACAGTCTGCGTGACTGGGGGCATGCAAAAGATTACGTGCGCATGCAA--TG 3745
Query 72743 GTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGGG 72791
| ||||||| |||||||| || ||||| | ||| ||||||||||||
Sbjct 3744 GATGATGCTCCAACAAGAGCAGCCAGATGATTTTGTAATTGCAACAGGG 3696
>seq118
Length=2377031
Score = 104 bits (114), Expect = 6e-17
Identities = 140/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || ||||| || || || | || || || ||||||
Sbjct 359082 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAG 359141
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || ||||||| || || || || |||||||| || || |||||
Sbjct 359142 ATCAGACGCTGCTG---ATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 359198
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || | || || || | ||||| ||||| ||||| || || ||
Sbjct 359199 TTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTC 359258
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 359259 ACGAAGATCTGCAT 359272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179633904979368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |