Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq71 114 3e-20
>seq71
Length=15183
Score = 114 bits (126), Expect = 3e-20
Identities = 237/349 (68%), Gaps = 8/349 (2%)
Strand=Plus/Minus
Query 68436 GTGCAAGAAATTCCTCAGACGGAAAATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTT 68495
||||| |||| || || | ||||| || || || |||| || ||||| |||| |||
Sbjct 4040 GTGCAGGAAACACCGCAAAAGGAAACAACACCTTTCCATCCGCGCAGCCCCTACGCTGTG 3981
Query 68496 GCAAAGTTGTACGCTTATTGGAT--CTGTAAAAATTACCGTGAGTCGTATAACATGTATG 68553
|| || |||||||||| ||||| | ||||| |||||||||| | || | |||||||
Sbjct 3980 GCTAAAATGTACGCTTACTGGATTACCGTAAA--TTACCGTGAGGCTTACGATATGTATG 3923
Query 68554 TATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACAGAGGCCATCAGTTCGTGACTC 68613
|| ||| ||||| || || || || || || | || | || || || |
Sbjct 3922 CCTGTAACGGGATTTTGTTTAACCATGAAAGCCCGCGTCGTGGTGAAACATTTGTAACAC 3863
Query 68614 GTAAAATCACGAAGGTGGTCGCGAATATTTTCAATGGTGTCGAAAAATGCATGTATCTCG 68673
| ||||| ||| | | | || |||||| |||| | ||||||||| |||| | |
Sbjct 3862 GCAAAATTACGCGTGGGCTGGCCAATATTGCTGTTGGTCTGGAAAAATGCCTGTACATGG 3803
Query 68674 GTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGT--AGAAGCAATGTG 68731
| ||||| | | || ||||| |||| || |||||||| | |||| ||
Sbjct 3802 GGAATATCAACAGTCTGCGTGACTGGGGGCATGCAAAAGATTACGTGCGCATGCAA--TG 3745
Query 68732 GTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGGG 68780
| ||||||| |||||||| || ||||| | ||| ||||||||||||
Sbjct 3744 GATGATGCTCCAACAAGAGCAGCCAGATGATTTTGTAATTGCAACAGGG 3696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102860838838600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |