Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq71 114 3e-20 >seq71 Length=15183 Score = 114 bits (126), Expect = 3e-20 Identities = 237/349 (68%), Gaps = 8/349 (2%) Strand=Plus/Minus Query 68436 GTGCAAGAAATTCCTCAGACGGAAAATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTT 68495 ||||| |||| || || | ||||| || || || |||| || ||||| |||| ||| Sbjct 4040 GTGCAGGAAACACCGCAAAAGGAAACAACACCTTTCCATCCGCGCAGCCCCTACGCTGTG 3981 Query 68496 GCAAAGTTGTACGCTTATTGGAT--CTGTAAAAATTACCGTGAGTCGTATAACATGTATG 68553 || || |||||||||| ||||| | ||||| |||||||||| | || | ||||||| Sbjct 3980 GCTAAAATGTACGCTTACTGGATTACCGTAAA--TTACCGTGAGGCTTACGATATGTATG 3923 Query 68554 TATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACAGAGGCCATCAGTTCGTGACTC 68613 || ||| ||||| || || || || || || | || | || || || | Sbjct 3922 CCTGTAACGGGATTTTGTTTAACCATGAAAGCCCGCGTCGTGGTGAAACATTTGTAACAC 3863 Query 68614 GTAAAATCACGAAGGTGGTCGCGAATATTTTCAATGGTGTCGAAAAATGCATGTATCTCG 68673 | ||||| ||| | | | || |||||| |||| | ||||||||| |||| | | Sbjct 3862 GCAAAATTACGCGTGGGCTGGCCAATATTGCTGTTGGTCTGGAAAAATGCCTGTACATGG 3803 Query 68674 GTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGT--AGAAGCAATGTG 68731 | ||||| | | || ||||| |||| || |||||||| | |||| || Sbjct 3802 GGAATATCAACAGTCTGCGTGACTGGGGGCATGCAAAAGATTACGTGCGCATGCAA--TG 3745 Query 68732 GTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGGG 68780 | ||||||| |||||||| || ||||| | ||| |||||||||||| Sbjct 3744 GATGATGCTCCAACAAGAGCAGCCAGATGATTTTGTAATTGCAACAGGG 3696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102860838838600