Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq185 150 2e-31 seq991 114 2e-20 >seq185 Length=662383 Score = 150 bits (166), Expect = 2e-31 Identities = 307/452 (68%), Gaps = 8/452 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || ||| |||||| || ||||| ||||| ||||||| ||| ||||||| Sbjct 113996 GTACTCGCCCACCTTCTTCTCAAAAAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCAT 114055 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 125877 || | || |||||||| | ||| | ||| || || || | || ||| || || Sbjct 114056 GAAGTTGAACGGGTTCTTGGTGTTGTAGATTTTTCCAACGCCCAACTCGACGAGCAGGCG 114115 Query 125878 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 125937 ||| | || |||||||||||| ||||| || ||||||| ||||| || || || Sbjct 114116 ATCAGCCACAAACTCAATGTACTGCGACATTAGGTCGCAGTTCATGCCGATCAGATT-CA 114174 Query 125938 TGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 ||| || || || | |||| ||| ||||| ||||| || || || | ||| || Sbjct 114175 CGGGCAGGGCATCGGTCAAGAACTCCTGTTCAATGTCCACAGCGTCACGAATGATCTCG- 114233 Query 125997 GAATGGTGTCCACCCCA---GGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACT 126053 ||| || | | | | |||| | || | || ||| | ||| ||||| | Sbjct 114234 --ATGATGCGCTCGCGACGCGGTCGCTGCACCAGATGCTGGAACATCAGCACCGCAAAGT 114291 Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113 | ||| ||||||||||| ||||||||||| || || |||||| ||| || ||||| | Sbjct 114292 CGCAGTGCAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATCA 114351 Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173 | || |||||||||| ||||||||| | ||| || ||||||||| ||||| | Sbjct 114352 GGCCGCGCTTCTTCAGCCAGAAAATAGAGGCAAAGCTGCCGCTGAAGAAGATGCCCTCGA 114411 Query 126174 CACACGCGAACGCAAAGAGACGCTCAGCAAAg 126205 | || || |||| || ||||| ||||| Sbjct 114412 CGGCGGCAAATGCAATGATCCGCTCTCCAAAG 114443 >seq991 Length=691118 Score = 114 bits (126), Expect = 2e-20 Identities = 674/1069 (63%), Gaps = 19/1069 (2%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| |||| |||| | ||| | ||||| |||||||| || || || || | Sbjct 357724 TGAACTGTATGGCGTTCGCAGCCGGCTTCGTGCGGAGATAGTACATTCCGGTTTTAAGGC 357783 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | |||||| | || | ||| || || | || |||| | ||||| || || | Sbjct 357784 CAGCCTTCCACGAGTAAAAATGTATGGACGTCAGCTTGCC-ATAGTTGGGCTCGGCAACA 357842 Query 113685 AGAG-GTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||| | ||| ||||||||||| ||||||||||| ||||| | ||| Sbjct 357843 TGAATGTTGAACGATTGACTCTGATCGATGAATGCACCACGATCCGCAGCCATTTTAATG 357902 Query 113744 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 ||| | ||| |||||||| || |||| || | | || | ||||| Sbjct 357903 GTGGACTTGACGGAGATCTCCCACACCGTCTTGTACAGATCGCGCACATGCTGGGGGATG 357962 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTG--ACCATGAGATCCTTCATATCCTTTG 113861 || ||||||| || || |||||| || || | | || | | ||||||||| | Sbjct 357963 GCCTCGATATTCTGAATTGAGCCA--CGGCTGGAAATTATCTGGTTCTTCATATCATCAT 358020 Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 113921 ||| | ||| || | |||||| || || || | || || || || || | Sbjct 358021 CCCACAAGTCAAGCTCCGTCAGATCCCTCAACAGGTGGTGGTTAACCACCTGGAATTCGC 358080 Query 113922 CCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 113981 | | ||| ||||| ||||||||| || ||||| ||||| ||| | || || || | Sbjct 358081 CGGAGAGAACGCGTCGTGTATAGATATTTGTGGTGTACGGCTCGAAGGATTCGTTATTGC 358140 Query 113982 CCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 114041 ||| || ||||| ||||| || || |||||||| || | || || ||| | || || Sbjct 358141 CCATTATCTGGGCAGTGGATGCCGTTGGCATGGGGGCGACCAGCAGAGAGTTCCTGACAC 358200 Query 114042 CCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 114101 | | || | | || ||||| || | ||||||| || | | ||| || | Sbjct 358201 CATGTTTCTTGATCGACTCCTTCAGCTTGGCCCAGTCCCAGAGGTTCGTTGGGACCTTGT 358260 Query 114102 GCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATG 114161 ||||||||| |||| || || || | | | || ||||| |||| || || | Sbjct 358261 CCCACATATCGTACTGAAGAATTCCCTTGCTTACGGGACTGCCCTCGTATGTTTCATACG 358320 Query 114162 GGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAA 114221 | || || ||| |||| ||| | || || || || || | | ||| || || |||| Sbjct 358321 GACCTTCGGCCTGGGCCAGTTCACAACTTGCTTCCAGTGCGCCATAATAGATAGTTTCAA 358380 Query 114222 AAATGCG-AGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATA 114280 | || | | || | | | ||||| ||| || | | || || || ||| Sbjct 358381 AGATCTGCTGGTTTAGGAGACCT-GCCTCCTCGCTTTCGTAAGGGAATCTCATCAGAATC 358439 Query 114281 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 114340 || |||| || | ||| || | || | |||||| |||||||| |||| ||| || || Sbjct 358440 AAGGCATCAGCAAAACCCTGAATGCCAATGCCAATGGGGCGATGCCTCAAATTTGATTTC 358499 Query 114341 CGAGCGGTCT-CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 114399 || || ||| || ||||||| |||| | || |||| | |||| ||||| || | || Sbjct 358500 CGGGC-CTCTGGCAGGGGATAATAATTGATGTCAATAATCTTATTCAGATTCTTAGCCAC 358558 Query 114400 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA---TTGAC 114456 ||| |||| || | || |||| | ||| | |||| ||| | || Sbjct 358559 TGTCTTAGTGACCTCCTTCAG--TTTC----TTAAAGTCGTACGTCTTCTCAGGGGTCAC 358612 Query 114457 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 114516 || | || ||||| || ||||| || || || | | | || || | || Sbjct 358613 GAACATGTTGAGAGCGATGGATGCCAGGTTGCAAACGGCGATTTCGTCGGGCGACGAATA 358672 Query 114517 CTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 114576 ||| | ||||| || || | ||| | ||| |||||||| | |||| ||||| Sbjct 358673 CTCAACGATTTCTGTGCAAAGATTACTGCACTTGATGGTGCCAACATTCTGCTGATTGCT 358732 Query 114577 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625 ||| |||| || ||||||||| | ||||| || || | || |||||| Sbjct 358733 CTTCCTGTTGCATGCATCCTTGAACAGCATATAAGGATTGCCAGTCTCC 358781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597343474856480