Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq185 150 2e-31
seq991 114 2e-20
>seq185
Length=662383
Score = 150 bits (166), Expect = 2e-31
Identities = 307/452 (68%), Gaps = 8/452 (2%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
||| || || ||| |||||| || ||||| ||||| ||||||| ||| |||||||
Sbjct 113996 GTACTCGCCCACCTTCTTCTCAAAAAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCAT 114055
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 125877
|| | || |||||||| | ||| | ||| || || || | || ||| || ||
Sbjct 114056 GAAGTTGAACGGGTTCTTGGTGTTGTAGATTTTTCCAACGCCCAACTCGACGAGCAGGCG 114115
Query 125878 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 125937
||| | || |||||||||||| ||||| || ||||||| ||||| || || ||
Sbjct 114116 ATCAGCCACAAACTCAATGTACTGCGACATTAGGTCGCAGTTCATGCCGATCAGATT-CA 114174
Query 125938 TGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996
||| || || || | |||| ||| ||||| ||||| || || || | ||| ||
Sbjct 114175 CGGGCAGGGCATCGGTCAAGAACTCCTGTTCAATGTCCACAGCGTCACGAATGATCTCG- 114233
Query 125997 GAATGGTGTCCACCCCA---GGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACT 126053
||| || | | | | |||| | || | || ||| | ||| ||||| |
Sbjct 114234 --ATGATGCGCTCGCGACGCGGTCGCTGCACCAGATGCTGGAACATCAGCACCGCAAAGT 114291
Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113
| ||| ||||||||||| ||||||||||| || || |||||| ||| || ||||| |
Sbjct 114292 CGCAGTGCAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATCA 114351
Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173
| || |||||||||| ||||||||| | ||| || ||||||||| ||||| |
Sbjct 114352 GGCCGCGCTTCTTCAGCCAGAAAATAGAGGCAAAGCTGCCGCTGAAGAAGATGCCCTCGA 114411
Query 126174 CACACGCGAACGCAAAGAGACGCTCAGCAAAg 126205
| || || |||| || ||||| |||||
Sbjct 114412 CGGCGGCAAATGCAATGATCCGCTCTCCAAAG 114443
>seq991
Length=691118
Score = 114 bits (126), Expect = 2e-20
Identities = 674/1069 (63%), Gaps = 19/1069 (2%)
Strand=Plus/Plus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||| |||| |||| | ||| | ||||| |||||||| || || || || |
Sbjct 357724 TGAACTGTATGGCGTTCGCAGCCGGCTTCGTGCGGAGATAGTACATTCCGGTTTTAAGGC 357783
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
| |||||| | || | ||| || || | || |||| | ||||| || || |
Sbjct 357784 CAGCCTTCCACGAGTAAAAATGTATGGACGTCAGCTTGCC-ATAGTTGGGCTCGGCAACA 357842
Query 113685 AGAG-GTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743
|| ||| | ||| ||||||||||| ||||||||||| ||||| | |||
Sbjct 357843 TGAATGTTGAACGATTGACTCTGATCGATGAATGCACCACGATCCGCAGCCATTTTAATG 357902
Query 113744 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803
||| | ||| |||||||| || |||| || | | || | |||||
Sbjct 357903 GTGGACTTGACGGAGATCTCCCACACCGTCTTGTACAGATCGCGCACATGCTGGGGGATG 357962
Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTG--ACCATGAGATCCTTCATATCCTTTG 113861
|| ||||||| || || |||||| || || | | || | | ||||||||| |
Sbjct 357963 GCCTCGATATTCTGAATTGAGCCA--CGGCTGGAAATTATCTGGTTCTTCATATCATCAT 358020
Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 113921
||| | ||| || | |||||| || || || | || || || || || |
Sbjct 358021 CCCACAAGTCAAGCTCCGTCAGATCCCTCAACAGGTGGTGGTTAACCACCTGGAATTCGC 358080
Query 113922 CCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 113981
| | ||| ||||| ||||||||| || ||||| ||||| ||| | || || || |
Sbjct 358081 CGGAGAGAACGCGTCGTGTATAGATATTTGTGGTGTACGGCTCGAAGGATTCGTTATTGC 358140
Query 113982 CCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 114041
||| || ||||| ||||| || || |||||||| || | || || ||| | || ||
Sbjct 358141 CCATTATCTGGGCAGTGGATGCCGTTGGCATGGGGGCGACCAGCAGAGAGTTCCTGACAC 358200
Query 114042 CCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 114101
| | || | | || ||||| || | ||||||| || | | ||| || |
Sbjct 358201 CATGTTTCTTGATCGACTCCTTCAGCTTGGCCCAGTCCCAGAGGTTCGTTGGGACCTTGT 358260
Query 114102 GCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATG 114161
||||||||| |||| || || || | | | || ||||| |||| || || |
Sbjct 358261 CCCACATATCGTACTGAAGAATTCCCTTGCTTACGGGACTGCCCTCGTATGTTTCATACG 358320
Query 114162 GGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAA 114221
| || || ||| |||| ||| | || || || || || | | ||| || || ||||
Sbjct 358321 GACCTTCGGCCTGGGCCAGTTCACAACTTGCTTCCAGTGCGCCATAATAGATAGTTTCAA 358380
Query 114222 AAATGCG-AGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATA 114280
| || | | || | | | ||||| ||| || | | || || || |||
Sbjct 358381 AGATCTGCTGGTTTAGGAGACCT-GCCTCCTCGCTTTCGTAAGGGAATCTCATCAGAATC 358439
Query 114281 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 114340
|| |||| || | ||| || | || | |||||| |||||||| |||| ||| || ||
Sbjct 358440 AAGGCATCAGCAAAACCCTGAATGCCAATGCCAATGGGGCGATGCCTCAAATTTGATTTC 358499
Query 114341 CGAGCGGTCT-CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 114399
|| || ||| || ||||||| |||| | || |||| | |||| ||||| || | ||
Sbjct 358500 CGGGC-CTCTGGCAGGGGATAATAATTGATGTCAATAATCTTATTCAGATTCTTAGCCAC 358558
Query 114400 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA---TTGAC 114456
||| |||| || | || |||| | ||| | |||| ||| | ||
Sbjct 358559 TGTCTTAGTGACCTCCTTCAG--TTTC----TTAAAGTCGTACGTCTTCTCAGGGGTCAC 358612
Query 114457 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 114516
|| | || ||||| || ||||| || || || | | | || || | ||
Sbjct 358613 GAACATGTTGAGAGCGATGGATGCCAGGTTGCAAACGGCGATTTCGTCGGGCGACGAATA 358672
Query 114517 CTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 114576
||| | ||||| || || | ||| | ||| |||||||| | |||| |||||
Sbjct 358673 CTCAACGATTTCTGTGCAAAGATTACTGCACTTGATGGTGCCAACATTCTGCTGATTGCT 358732
Query 114577 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625
||| |||| || ||||||||| | ||||| || || | || ||||||
Sbjct 358733 CTTCCTGTTGCATGCATCCTTGAACAGCATATAAGGATTGCCAGTCTCC 358781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597343474856480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |