Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq991 197 1e-45
>seq991
Length=691118
Score = 197 bits (218), Expect = 1e-45
Identities = 832/1294 (64%), Gaps = 45/1294 (3%)
Strand=Plus/Minus
Query 94001 ACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTG 94060
||||||| | || || || | ||||| || || || | | |||||| | | ||||
Sbjct 359265 ACTGTGCCATGATTTCCAAGTCGGCGGGCGGCATTGGCCTGAATGTCCATTGCATCCGTG 359206
Query 94061 CCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCC 94120
||| ||| ||| || | || || ||||| |||||||| |||||||| || ||||| |
Sbjct 359205 CCAAGGGCACCTCGATATGTGGCACGAATGGGACCTCCAATGGCCTCGTTCCCATGCTGC 359146
Query 94121 GGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTT 94180
| ||||||||||| | ||||| |||||||| |||||||| || | | | || | |
Sbjct 359145 GAGTCTTCAACAATGTAGCGCGTTACGTGGATCAGGGTGGCGGCAAGCGCCCTGGCGCCT 359086
Query 94181 TCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGA 94240
| || |||| | ||||||||||| | || || | ||| | || ||| ||||
Sbjct 359085 TTGCCATCTACTTGGAGCCCTGGCATTCCGATGTTTTTGAATTCTTGGAACTGAAGAAGA 359026
Query 94241 ACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACC 94300
|| ||| || || | | | || | || | || || || |||||| | || || |
Sbjct 359025 ACACCGGTAAGGAAGAGAATCGTGCTCGCGATTTATTTTATGCCCTCTGGATACCTGATC 358966
Query 94301 TTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTC 94360
| |||||||| ||||| ||| ||| |||| || | || || | | ||||
Sbjct 358965 TCTTTATGAAGCGCGTTGAGGCAAATGAGAACTGGTCGCTGATGTGCCCGCACAAGTGTC 358906
Query 94361 CCGGACTGTCCGACGTTTGTGGATCG-CG-TTTTGAAGACTTGTATGCTC-GTTACGAAT 94417
|||| ||| || ||||| || || || ||||| | ||||| ||| |||||
Sbjct 358905 CCGGCCTGCAGGATGTTTGGGG--CGACGAATTTGACCAATTGTA-CCTCAAATACGAGG 358849
Query 94418 CGCAGGGCAAGGCCA---GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGG 94474
| | || || |||| ||| ||||| | ||| | |||||| ||| | |
Sbjct 358848 CCGAAGGAAAAGCCAATCGGACGGTTA---AGGCTCAGTCCCTGTGGTTCGCCATCATTG 358792
Query 94475 ACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGT 94534
| | ||||||||||| || | || || || |||||||||| | |||| |||
Sbjct 358791 AGGCGCAGGTGGAGACTGGCAATCCTTATATGCTGTTCAAGGATGCATGCAACAGGAAGA 358732
Query 94535 CCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGT 94594
||| |||||| | | || |||||| || ||||| ||||| || || || ||||
Sbjct 358731 GCAATCAGCAGAATGTTGGCACCATCAAGTGCAGTAATCTTTGCACAGAAATCGTTGAGT 358672
Query 94595 ATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCG 94654
|| | || || ||||| || || || || ||||||| |||||| || || || | |
Sbjct 358671 ATTCGTCGCCCGACGAAATCGCCGTTTGCAACCTGGCATCCATC--GCTCTCAACAT--G 358616
Query 94655 TGCGAGATGCCT-ACACGTC-TACTGCTTCGTTCG-ATCTGGAGGAGCTTGTGAACTTCG 94711
| || || ||| | | | | ||| ||| | | | ||| ||||| | ||| |
Sbjct 358615 TTCGTGACCCCTGAGAAGACGTACGACTT--TAAGAAACTGAAGGAGGT----CACTAAG 358562
Query 94712 CGGGAAGGATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGG 94771
| ||| ||| ||||| | | | || |||| || | || ||| | || |
Sbjct 358561 -----ACAGTGGCTAAGAATCTGAATAAGATTATTGACATCAATTATTATCCCCTGCCAG 358507
Query 94772 AGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGG 94831
|||| ||| ||||| ||| |||||| ||||| ||||| ||| | |||||||| || |
Sbjct 358506 AGGCCCGGAAATCAAATTTGAGGCATCGCCCCATTGGCATTGGCATTCAGGGTTTTGCTG 358447
Query 94832 ACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGT---TTGAATT 94888
| || || | ||||| | | || ||||| ||| | ||| ||| | ||
Sbjct 358446 ATGCCTTGATTCTGATGAGATTCCCTTACGA---AAGCGAGGAGGCAGGTCTCCTAAACC 358390
Query 94889 TGAACATATTCGAAAGCATTTATTACGGGGC-CATGAAACAATCCGTCCACTTGGCCAGA 94947
| | || || |||| || ||||| || || | ||| ||| || ||| | |||
Sbjct 358389 AGCAGATCTTTGAAACTATCTATTATGGCGCACTGGAAGCAAGTTGTGAACTGGCCCA-- 358332
Query 94948 TCGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAG 95007
|| || || || | ||| | | | || ||| | |||| ||| |||||
Sbjct 358331 --GGCCGAAGGTCCGTATGAAACATACGAGGGCAGTCCCGTAAGCAAGGGAATTCTTCAG 358274
Query 95008 TTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTG 95065
| ||| | |||| | || || || | ||||||| ||||| | | | |
Sbjct 358273 TACGATATGTGGGACAAGGTCCCAACGAACCTCTGGGACTGGGCCAAGCTGAAGGAGTCG 358214
Query 95066 ATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCA 95125
| | | ||||| ||||| | ||| | ||||| || ||||||||||| ||||| ||||
Sbjct 358213 A--TCAAGAAACATGGTGTCAGGAACTCTCTGCTGGTCGCCCCCATGCCAACGGCATCCA 358156
Query 95126 CGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACA 95185
| || ||||| | ||||| ||||| || ||||| || | |||| | || | || |
Sbjct 358155 CTGCCCAGATAATGGGCAATAACGAATCCTTCGAGCCGTACACCACAAATATCTATACAC 358096
Query 95186 GGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGT 95245
| || || ||| |||| ||||||| || | ||| | ||||| | |||| ||||||
Sbjct 358095 GACGCGTTCTCTCCGGCGAATTCCAGGTGGTTAACCACCACCTGTTGAGGGATCTGACGG 358036
Query 95246 CTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCA 95279
|| | |||||| ||| | | ||||||||
Sbjct 358035 AGCTTGACTTGTGGGATGATGATATGAAGAACCA 358002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494714814441760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |