Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq98 89.7 4e-13
seq1117 87.8 1e-12
>seq98
Length=20832
Score = 89.7 bits (98), Expect = 4e-13
Identities = 146/209 (70%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || || |||||||| || || || |||||||| ||| ||| | | | || ||
Sbjct 11186 ACCAAGTGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCCTCC 11245
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
|| |||||||| ||| | || | |||||| ||||| | || ||||| ||||||||
Sbjct 11246 AACTGTTTGCCGGCGAAAATGAGACGCTGCTGGTC-TGGGGGATTCCCTCCTTGTCTTGG 11304
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || || | || || || ||| | || || || ||||||||||| ||
Sbjct 11305 ATCTTGGCCTTCACGTTCTCGATGGTGTCGGAAGGCTCCACCTCCAAGGTAATGGTCTTG 11364
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||| || || || || |||||
Sbjct 11365 CCAGTAAGAGTCTTCACGAAGATCTGCAT 11393
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/209 (69%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || || |||||||| || || || ||||| ||||| || | | | | || ||
Sbjct 10048 ACCAAGTGCAGGGTAGATTCCTTCTGGATGTTATAATCCGACAGGGTGCGCCCATCCTCC 10107
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||| ||| | ||||||||||| ||||| | || ||||| ||||||||
Sbjct 10108 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTC-TGGGGGATTCCCTCCTTGTCTTGG 10166
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || || | || || || ||| | || || || ||||||||||| ||
Sbjct 10167 ATCTTGGCCTTCACGTTCTCGATGGTGTCGGAAGGCTCCACCTCCAAGGTAATGGTCTTG 10226
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||| || || || || |||||
Sbjct 10227 CCAGTAAGAGTCTTCACGAAGATCTGCAT 10255
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || || |||||||| || || || ||||| ||||| || | | | || ||
Sbjct 11641 ACCAAGTGCAGGGTAGATTCCTTCTGGATGTTATAATCAGACAGGGTGCGGCCATCCTCC 11700
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||| ||| | ||||||||||| ||||| || ||||| ||||||||
Sbjct 11701 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGG 11760
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|||||| || || | || || || ||| | || || |||| ||| ||||| ||
Sbjct 11761 ATTTTGGCCTTCACGTTCTCAATGGTGTCGGAAGGCTCCACCTCTAGGGTGATGGTCTTG 11820
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| |||||||| || || || || |||||
Sbjct 11821 CCAGTCAGAGTCTTCACGAAGATCTGCAT 11849
Score = 82.4 bits (90), Expect = 5e-11
Identities = 144/209 (69%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || || |||||||| || ||||| ||||| ||||| || | | | || ||
Sbjct 12551 ACCAAGTGCAGGGTAGATTCCTTTTGGATGTTATAATCAGACAGGGTGCGGCCATCCTCC 12610
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||| ||| | ||||||||||| ||||| | || ||||| ||||||||
Sbjct 12611 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTC--TGGGGATTCCCTCCTTGTCCTGG 12668
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|||||| || || | || || || ||| | || || || | ||| ||||| ||
Sbjct 12669 ATTTTGGCCTTCACGTTCTCAATGGTGTCGGAAGGCTCCACCTCCAGGGTGATGGTCTTG 12728
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||| || || || || |||||
Sbjct 12729 CCAGTAAGAGTCTTCACGAAGATCTGCAT 12757
>seq1117
Length=387944
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||||||||| || || || || |||||||| ||| || | | | ||||| | ||
Sbjct 178729 ATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTG 178788
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TT 15091
||||| ||| | ||||||||||| ||||| || ||||| |||||||| || ||
Sbjct 178789 CTTGCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATCTT 178848
Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151
||| || ||| | || || || ||| | || || || || |||||||| || || |
Sbjct 178849 TGC-CTTCACATTCTCGATGGTGTCGGAAGGCTCCACCTCCAAAGTAATGGTCTTGCCAG 178907
Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176
| ||||| || || || || |||||
Sbjct 178908 TAAGAGTCTTCACGAAGATCTGCAT 178932
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||||||||| || || || || |||||||| ||| || | | | ||||| | ||
Sbjct 179869 ATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTG 179928
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TT 15091
||||| ||| | ||||||||||| ||||| || ||||| |||||||| || ||
Sbjct 179929 CTTGCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATCTT 179988
Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151
||| || ||| | || || || ||| | || || || || |||||||| || || |
Sbjct 179989 TGC-CTTCACATTCTCGATGGTGTCGGAAGGCTCCACCTCCAAAGTAATGGTCTTGCCAG 180047
Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176
| ||||| || || || || |||||
Sbjct 180048 TGAGAGTCTTCACGAAGATCTGCAT 180072
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||||||||| || || || || |||||||| ||| ||| | | | || || | ||
Sbjct 175993 ATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCATCCTCCAGCTG 176052
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|||||| ||| | ||||||||||| ||||| || ||||| |||||||| || ||
Sbjct 176053 TTTGCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATCTT 176112
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
|| || | || || || ||| | || || || || |||||||| || || ||
Sbjct 176113 AGCCTTCACGTTCTCAATGGTGTCGGAAGGCTCCACCTCCAAAGTAATGGTCTTGCCAGT 176172
Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176
||||| || || || || |||||
Sbjct 176173 AAGAGTCTTCACGAAGATCTGCAT 176196
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||||||||| || || || || |||||||| ||| ||| | | | || || | ||
Sbjct 176905 ATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGTCCATCCTCCAGCTG 176964
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|||||| ||| | ||||||||||| ||||| || ||||| |||||||| || ||
Sbjct 176965 TTTGCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATCTT 177024
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
|| || | || || || ||| | || || || || |||||||| || || ||
Sbjct 177025 AGCCTTCACGTTCTCAATGGTGTCGGAAGGCTCCACCTCCAAAGTAATGGTCTTGCCAGT 177084
Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176
||||| || || || || |||||
Sbjct 177085 AAGAGTCTTCACGAAGATCTGCAT 177108
Score = 82.4 bits (90), Expect = 5e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| || || |||||||| || || || ||||| ||||| || | | | || ||
Sbjct 175531 AACCAAGTGCAGGGTAGATTCCTTCTGGATGTTATAATCCGACAGGGTGCGGCCATCCTC 175590
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
| || ||||| ||| | ||||||||||| ||||| || ||||| ||||||||
Sbjct 175591 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTG 175650
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
|||||| || || | || || || ||| | || || || || |||||||| ||
Sbjct 175651 GATTTTGGCCTTCACGTTCTCAATGGTGTCGGAAGGCTCCACCTCCAAAGTAATGGTCTT 175710
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||| || || || || |||||
Sbjct 175711 GCCAGTAAGAGTCTTCACGAAGATCTGCAT 175740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357386093650460
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