Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq185 147 3e-30 >seq185 Length=662383 Score = 147 bits (162), Expect = 3e-30 Identities = 307/451 (68%), Gaps = 6/451 (1%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || ||| |||||| || ||||| ||||| || || || ||| ||||||| Sbjct 113996 GTACTCGCCCACCTTCTTCTCAAAAAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCAT 114055 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 127350 || | || |||||||| | ||| | ||| || || || | || ||| || || Sbjct 114056 GAAGTTGAACGGGTTCTTGGTGTTGTAGATTTTTCCAACGCCCAACTCGACGAGCAGGCG 114115 Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410 ||| | || |||||||||||| ||||| || ||||||| ||||| || || || Sbjct 114116 ATCAGCCACAAACTCAATGTACTGCGACATTAGGTCGCAGTTCATGCCGATCAGATT-CA 114174 Query 127411 TGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG- 127468 ||| || || || | |||| ||| |||||||||||||| || || | ||| || Sbjct 114175 CGGGCAGGGCATCGGTCAAGAACTCCTGTTCAATGTCCACAGCGTCACGAATGATCTCGA 114234 Query 127469 TGAATAG-TGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAACTC 127527 ||| | | | || | |||| | | | || ||| | ||| ||||| || Sbjct 114235 TGATGCGCTCGCGACGC--GGTCGCTGCACCAGATGCTGGAACATCAGCACCGCAAAGTC 114292 Query 127528 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 127587 ||| ||||||||||| ||||||||||| || || |||||| ||| || ||||| || Sbjct 114293 GCAGTGCAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAG 114352 Query 127588 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647 || |||||||||| ||||||||| | ||| ||| ||||||||| ||||| || Sbjct 114353 GCCGCGCTTCTTCAGCCAGAAAATAGAGGCAAAGCTGCCGCTGAAGAAGATGCCCTCGAC 114412 Query 127648 ACACGCGAACGCAAATAGACGCTCGGCAAAG 127678 || || |||| | ||||| ||||| Sbjct 114413 GGCGGCAAATGCAATGATCCGCTCTCCAAAG 114443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613496801052960