Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq185 147 3e-30
>seq185
Length=662383
Score = 147 bits (162), Expect = 3e-30
Identities = 307/451 (68%), Gaps = 6/451 (1%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
||| || || ||| |||||| || ||||| ||||| || || || ||| |||||||
Sbjct 113996 GTACTCGCCCACCTTCTTCTCAAAAAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCAT 114055
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 127350
|| | || |||||||| | ||| | ||| || || || | || ||| || ||
Sbjct 114056 GAAGTTGAACGGGTTCTTGGTGTTGTAGATTTTTCCAACGCCCAACTCGACGAGCAGGCG 114115
Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410
||| | || |||||||||||| ||||| || ||||||| ||||| || || ||
Sbjct 114116 ATCAGCCACAAACTCAATGTACTGCGACATTAGGTCGCAGTTCATGCCGATCAGATT-CA 114174
Query 127411 TGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG- 127468
||| || || || | |||| ||| |||||||||||||| || || | ||| ||
Sbjct 114175 CGGGCAGGGCATCGGTCAAGAACTCCTGTTCAATGTCCACAGCGTCACGAATGATCTCGA 114234
Query 127469 TGAATAG-TGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAACTC 127527
||| | | | || | |||| | | | || ||| | ||| ||||| ||
Sbjct 114235 TGATGCGCTCGCGACGC--GGTCGCTGCACCAGATGCTGGAACATCAGCACCGCAAAGTC 114292
Query 127528 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 127587
||| ||||||||||| ||||||||||| || || |||||| ||| || ||||| ||
Sbjct 114293 GCAGTGCAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAG 114352
Query 127588 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647
|| |||||||||| ||||||||| | ||| ||| ||||||||| ||||| ||
Sbjct 114353 GCCGCGCTTCTTCAGCCAGAAAATAGAGGCAAAGCTGCCGCTGAAGAAGATGCCCTCGAC 114412
Query 127648 ACACGCGAACGCAAATAGACGCTCGGCAAAG 127678
|| || |||| | ||||| |||||
Sbjct 114413 GGCGGCAAATGCAATGATCCGCTCTCCAAAG 114443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613496801052960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |