Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq991 138 1e-27 >seq991 Length=691118 Score = 138 bits (152), Expect = 1e-27 Identities = 667/1043 (64%), Gaps = 31/1043 (3%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 |||||||||||||| ||||| || || || ||||||| ||| | ||| || || | Sbjct 357756 CGGAGATAGTACATTCCGGTTTTAAGGCCAGCCTTCCACGAGTAAAAATGTATGGACGTC 357815 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAA-AAGATTCATACTTTGACTCTGGTCAATGAA 105708 |||||| ||| ||||| || || | || || | ||||||||| || ||||| Sbjct 357816 AGCTTGC-CATAGTTGGGCTCGGCAACATGAATGTTGAACGATTGACTCTGATCGATGAA 357874 Query 105709 GCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCG 105768 |||||| | || ||||| | |||| ||| | ||| |||||||| || Sbjct 357875 TGCACCACGATCCGCAGCCATTTTAATGGTGGACTTGACGGAGATCTCCCACACCGTCTT 357934 Query 105769 GTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTT 105828 ||| |||| | || | ||||| | |||||| |||||||| || | | || Sbjct 357935 GTACAGATCGCGCACATGCTGGGGGATGGCCTCGATATTCTGAATTGAGCCAC--GGCTG 357992 Query 105829 GACC--ATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886 || || | | ||||||||| | ||| | ||| || | | ||||| | | Sbjct 357993 GAAATTATCTGGTTCTTCATATCATCATCCCACAAGTCAAGCTCCGTCAGATCCCTCAAC 358052 Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946 || || | ||| || | | || || || | ||| | || |||||| || || Sbjct 358053 AGGTGGTGGTTAACCACCTGGAATTCGCCGGAGAGAACGCGTCGTGTATAGATATTTGTG 358112 Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||||| || || ||| |||| ||||| |||| || || || ||||| || |||||||| Sbjct 358113 GTGTACGGCTCGAAGGATTCGTTATTGCCCATTATCTGGGCAGTGGATGCCGTTGGCATG 358172 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066 || || | || ||| ||| | | ||| | || |||||| ||||| || || Sbjct 358173 GGGGCGACCAGCAGAGAGTTCCTGACACCATGTTTCTTGATCGACTCCTTCAGCTTGGCC 358232 Query 106067 CAGTCGTAGTTGAGCTTGGTTTC-ACCTT--CCCACATATCAAATTGAAGCA-CCCCTTG 106122 ||||| || || || ||| ||||| |||||||||| | ||||| | |||||| Sbjct 358233 CAGTCCCAG---AGGTTCGTTGGGACCTTGTCCCACATATCGTACTGAAGAATTCCCTTG 358289 Query 106123 -GGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 106181 || |||| ||||| |||| ||||| | ||||| ||| | |||| |||||| | Sbjct 358290 CTTAC--GGGACTGCCCTCGTATGTTTCATACGGACCTTCGGCCTGGGCCAGTTCACAAC 358347 Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA--TCTCCTTGGC 106239 | || ||||| | | | ||| || ||||||||||| | || | ||| || Sbjct 358348 TTGCTTCCAGTGCGCCATAATAGATAGTTTCAAAGATCTGCTGGTTTAGGAGACCT--GC 358405 Query 106240 TTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 106299 || || || | | | | | || ||| || |||| || | ||| |||| || Sbjct 358406 CTCCTCGCTTTCGTAAGGGAATCTCATCAGAATCAAGGCATCAGCAAAACCCTGAATGCC 358465 Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAACGGGATAAAAAT 106358 | ||||| || | || | || ||| || || || || ||| | ||||||| ||| Sbjct 358466 AATGCCAATGGGGCGATGCCTCAAATTTGATTTCCGGGC-CTCTGGCAGGGGATAATAAT 358524 Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418 | ||||||| | || ||||| || | || |||| |||| || | ||||| | Sbjct 358525 TGATGTCAATAATCTTATTCAGATTCTTAGCCACTGTCTTAGTGACCTCCTTCAGTTTCT 358584 Query 106419 CATAATCAAAAGTGCGAGTCTCTTCA---TTGACATACTTTGGAAGGGCGATTGATGCCA 106475 | | || || | |||| ||| | || || | || ||||| ||||||| Sbjct 358585 TAAAGTC----GTAC--GTCTTCTCAGGGGTCACGAACATGTTGAGAGCGATGGATGCCA 358638 Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535 |||||||| || | || || | ||||| | |||||||| || | || Sbjct 358639 GGTTGCAAACGGCGATTTCGTCGGGCGACGAATACTCAACGATTTCTGTGCAAAGATTAC 358698 Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595 | ||| || || || | ||||| || || ||||| ||||||| ||||||||| | | Sbjct 358699 TGCACTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCATGCATCCTTGAACA 358758 Query 106596 GCATGTAGGGCGTCCCCGTCTCC 106618 |||| || || | || |||||| Sbjct 358759 GCATATAAGGATTGCCAGTCTCC 358781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589970799825440