Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq762 87.8 3e-12 seq736 87.8 3e-12 >seq762 Length=13283 Score = 87.8 bits (96), Expect = 3e-12 Identities = 88/113 (78%), Gaps = 1/113 (1%) Strand=Plus/Minus Query 113784 GTCTGGGGTTCAAGTCCTCATGGGCCTGCCAAGTTTGGGGGATTAGCTCAGTTGGAATGA 113843 ||| | ||||||||||||| |||| ||| ||||||||| |||||||| ||| | || Sbjct 9764 GTCGGAGGTTCAAGTCCTCCCTGGCCCACCAGGTTTGGGGGCATAGCTCAGCTGGGA-GA 9706 Query 113844 GCGACTGGTTTGCAACCAGTAGGTCATCGGTTCGACCCCGATATCCTCCACCA 113896 || ||| ||||||| ||| |||| ||||||||| |||| ||||||||| Sbjct 9705 GCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGAACCCGTCTGCCTCCACCA 9653 >seq736 Length=32925 Score = 87.8 bits (96), Expect = 3e-12 Identities = 88/113 (78%), Gaps = 1/113 (1%) Strand=Plus/Minus Query 113784 GTCTGGGGTTCAAGTCCTCATGGGCCTGCCAAGTTTGGGGGATTAGCTCAGTTGGAATGA 113843 ||| | ||||||||||||| |||| ||| ||||||||| |||||||| ||| | || Sbjct 30586 GTCGGAGGTTCAAGTCCTCCCTGGCCCACCAGGTTTGGGGGCATAGCTCAGCTGGGA-GA 30528 Query 113844 GCGACTGGTTTGCAACCAGTAGGTCATCGGTTCGACCCCGATATCCTCCACCA 113896 || ||| ||||||| ||| |||| ||||||||| |||| ||||||||| Sbjct 30527 GCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGAACCCGTCTGCCTCCACCA 30475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752592043348640