Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1171 93.3 5e-14 >seq1171 Length=1009974 Score = 93.3 bits (102), Expect = 5e-14 Identities = 186/272 (68%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 153746 TGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCA 153805 ||| |||||||| |||| || | || || |||| |||| ||||| || || || Sbjct 960281 TGACATTGCTGTGGGTACCTCTCAGCGCTTGGGAGTTCCCCTGGGTTATGGTGGCCCCCA 960340 Query 153806 TGCTGCATTCTTTGCAACAACAGACA-AGTATAAGA-GAAAGATACCTGGCAGAATTGTA 153863 ||||| ||||||||| | || ||| ||| | | | ||| || ||| | || | Sbjct 960341 TGCTGGATTCTTTGC--CTGCAAACAGAGTCTGGTACGCCTGATGCCAGGCCGCATGATC 960398 Query 153864 GGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAG 153923 ||| | | || | || |||||| | || || | | || || ||||| | ||| Sbjct 960399 GGTGTGACCCGGGACATGGACGGTAATGATGCCTATCGCCTGGCCCTGCAGACACGCGAG 960458 Query 153924 CAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCT 153983 ||||| ||| | || ||||| || ||||||||||| ||||||||||| || || ||||| Sbjct 960459 CAGCACATCCGCAGGGACAAGGCCACCAGTAACATTTGCACAGCTCAAGCTCTACTGGCC 960518 Query 153984 AATATGTCTGGATTCTATGCAGCATATCATGG 154015 || ||||| | | ||||| |||||||| Sbjct 960519 AACATGTCGGCCATGTATGCCATCTATCATGG 960550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579202982343040