Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14]
1,356 sequences; 198,035,861 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1171 93.3 5e-14
>seq1171
Length=1009974
Score = 93.3 bits (102), Expect = 5e-14
Identities = 186/272 (68%), Gaps = 4/272 (1%)
Strand=Plus/Plus
Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480
|||||||||||| |||| || | || || |||| |||| || || || || ||
Sbjct 960281 TGACATTGCTGTGGGTACCTCTCAGCGCTTGGGAGTTCCCCTGGGTTATGGTGGCCCCCA 960340
Query 158481 TGCTGCATTCTTTGCAACAACAGACA-AGTATAAGA-GAAAGATACCTGGCAGAATTGTA 158538
||||| ||||||||| | || ||| ||| | | | ||| || ||| | || |
Sbjct 960341 TGCTGGATTCTTTGC--CTGCAAACAGAGTCTGGTACGCCTGATGCCAGGCCGCATGATC 960398
Query 158539 GGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAG 158598
||| | | || | || |||||| | || || | | || || ||||| | |||
Sbjct 960399 GGTGTGACCCGGGACATGGACGGTAATGATGCCTATCGCCTGGCCCTGCAGACACGCGAG 960458
Query 158599 CAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCT 158658
||||| ||| | || ||||| || ||||||||||| |||||||| ||||| || |||||
Sbjct 960459 CAGCACATCCGCAGGGACAAGGCCACCAGTAACATTTGCACAGCTCAAGCTCTACTGGCC 960518
Query 158659 AATATGTCTGGGTTCTATGCAGCATATCATGG 158690
|| ||||| | | ||||| ||||||||
Sbjct 960519 AACATGTCGGCCATGTATGCCATCTATCATGG 960550
Score = 89.7 bits (98), Expect = 6e-13
Identities = 174/249 (70%), Gaps = 6/249 (2%)
Strand=Plus/Plus
Query 159534 TGAACTGTCATGTATTATGATTACATATCCATCTACACATGG-TGTATTTGAAACAAACA 159592
||||||||| || | ||||| || ||||| || || ||||| ||| || || |||||
Sbjct 961486 TGAACTGTCCTGCCTGATGATCACCTATCCGTCCAC-CATGGGTGTCTTCGAGG-AAACA 961543
Query 159593 TCAGACAGATATGTA-AGATTGTTC-ATGAGAATGGTGGTCAGGTATATCTTGATGGTGC 159650
| | || || | | | || || | || |||| || ||||| || || ||||||||
Sbjct 961544 GTGG-CGGACATCTGCACACTGATCCACAAGCATGGAGGACAGGTCTACCTGGATGGTGC 961602
Query 159651 AAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCA 159710
||| | ||||| ||||| || | || | ||||| || ||||| | ||
Sbjct 961603 CAATATGAATGCCCAGGTGGGATTGTGCCGGCCTGGAGACTACGGCAGTGATGTGTCCCA 961662
Query 159711 TCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCC 159770
||| ||||| || ||||| ||||||||||| || || ||||| ||||| || | |||||
Sbjct 961663 TCTGAACTTGCACAAGACCTTCTGTATTCCGCACGGTGGTGGTGGTCCAGGAATGGGTCC 961722
Query 159771 TATTGGTGT 159779
||||| ||
Sbjct 961723 CATTGGCGT 961731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588041232532160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |