Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20serrata_20[refseq_20GCF_5F002093755.1_202017-04-14] 1,356 sequences; 198,035,861 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq59 96.9 5e-15 >seq59 Length=1347070 Score = 96.9 bits (106), Expect = 5e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 197077 TTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACC 197136 || || | || ||| ||||| || | ||| | || ||||| || ||||| ||| Sbjct 618395 TTCTCTGTATCGTAGCAGGCAAGCAGGAATCCTCCATAGGTGCCTGTTCTTCGGCCCTTG 618336 Query 197137 CCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCT 197196 || ||| |||| || || || || | ||||||| ||||| ||| |||||||| Sbjct 618335 CCTTTGTAGCCGCCAATGACTACTAAGTCCAGAGAGTCGCCCACATTGGAGATGTAATCC 618276 Query 197197 TTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCC 197256 || ||||| |||||||| | | |||||||| || ||||||||||| || | | ||| Sbjct 618275 TTTTTCAGCTTGAGCCAATTACGTGATCTCTTAGCTATCTCGTAGGTGGCCTCCTCATCC 618216 Query 197257 AGGGTCTTGATCATCAATCCCTCGCA 197282 | ||||| | ||| || |||||||| Sbjct 618215 AACGTCTTCACCATTAAACCCTCGCA 618190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676718129433280